Cluster: HRGMv2_3678_CGC9
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3678
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3678_4 | HRGMv2_3678_4_111 | 122427 | 123146 | + | 4.B.1.1.2 |
| pfam | HRGMv2_3678_4 | HRGMv2_3678_4_112 | 123238 | 124455 | - | GTP_cyclohydro2 | DHBP_synthase |
| CAZyme | HRGMv2_3678_4 | HRGMv2_3678_4_113 | 124707 | 126110 | - | AA4 |
Gene ID: HRGMv2_3678_4_111
Type: TC
Location: 122427 - 123146 (+)
Type: TC
Location: 122427 - 123146 (+)
Gene ID: HRGMv2_3678_4_112
Type: pfam
Location: 123238 - 124455 (-)
Type: pfam
Location: 123238 - 124455 (-)
Gene ID: HRGMv2_3678_4_113
Type: CAZyme
Location: 124707 - 126110 (-)
Type: CAZyme
Location: 124707 - 126110 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Caecibacter
Species
Caecibacter sp003467125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.