Cluster: HRGMv2_3678_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3678
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3678_2 | HRGMv2_3678_2_59 | 58410 | 59228 | - | CE4 |
| pfam | HRGMv2_3678_2 | HRGMv2_3678_2_60 | 59302 | 60264 | - | 2-Hacid_dh | 2-Hacid_dh_C |
| pfam | HRGMv2_3678_2 | HRGMv2_3678_2_61 | 60476 | 62011 | - | BPD_transp_1 |
| TC | HRGMv2_3678_2 | HRGMv2_3678_2_62 | 62008 | 62757 | - | 3.A.1.9.1 |
Gene ID: HRGMv2_3678_2_59
Type: CAZyme
Location: 58410 - 59228 (-)
Type: CAZyme
Location: 58410 - 59228 (-)
Gene ID: HRGMv2_3678_2_60
Type: pfam
Location: 59302 - 60264 (-)
Type: pfam
Location: 59302 - 60264 (-)
Gene ID: HRGMv2_3678_2_61
Type: pfam
Location: 60476 - 62011 (-)
Type: pfam
Location: 60476 - 62011 (-)
Gene ID: HRGMv2_3678_2_62
Type: TC
Location: 62008 - 62757 (-)
Type: TC
Location: 62008 - 62757 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Caecibacter
Species
Caecibacter sp003467125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.