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Cluster: HRGMv2_3678_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3678_20 HRGMv2_3678_20_11 12540 13781 + 2.A.6.3.7
TC HRGMv2_3678_20 HRGMv2_3678_20_12 13797 16901 + 2.A.6.3.1
CAZyme HRGMv2_3678_20 HRGMv2_3678_20_13 17059 18006 + GT2
TC HRGMv2_3678_20 HRGMv2_3678_20_14 18073 18816 - 3.A.1.5.41
TC HRGMv2_3678_20 HRGMv2_3678_20_15 18829 19587 - 3.A.1.5.43
TC HRGMv2_3678_20 HRGMv2_3678_20_16 19606 21153 - 3.A.1.5.20
TC HRGMv2_3678_20 HRGMv2_3678_20_17 21159 21974 - 3.A.1.5.27
TC HRGMv2_3678_20 HRGMv2_3678_20_18 21978 22916 - 3.A.1.5.3
Gene ID: HRGMv2_3678_20_11
Type: TC
Location: 12540 - 13781 (+)
Gene ID: HRGMv2_3678_20_12
Type: TC
Location: 13797 - 16901 (+)
Gene ID: HRGMv2_3678_20_13
Type: CAZyme
Location: 17059 - 18006 (+)
Gene ID: HRGMv2_3678_20_14
Type: TC
Location: 18073 - 18816 (-)
Gene ID: HRGMv2_3678_20_15
Type: TC
Location: 18829 - 19587 (-)
Gene ID: HRGMv2_3678_20_16
Type: TC
Location: 19606 - 21153 (-)
Gene ID: HRGMv2_3678_20_17
Type: TC
Location: 21159 - 21974 (-)
Gene ID: HRGMv2_3678_20_18
Type: TC
Location: 21978 - 22916 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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