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Cluster: HRGMv2_3678_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3678_18 HRGMv2_3678_18_12 14278 15687 - AA4
pfam HRGMv2_3678_18 HRGMv2_3678_18_13 15934 16653 - DUF554
TF HRGMv2_3678_18 HRGMv2_3678_18_14 16736 18331 - HTH_AraC | HTH_AraC
TC HRGMv2_3678_18 HRGMv2_3678_18_15 18358 19848 - 8.A.59.2.1
pfam HRGMv2_3678_18 HRGMv2_3678_18_16 20468 21763 + DDE_Tnp_ISL3
TC HRGMv2_3678_18 HRGMv2_3678_18_17 21932 23257 - 2.A.1.14.3
pfam HRGMv2_3678_18 HRGMv2_3678_18_18 23284 24546 - Lar_N
TC HRGMv2_3678_18 HRGMv2_3678_18_19 24691 25902 - 2.A.1.14.3
Gene ID: HRGMv2_3678_18_12
Type: CAZyme
Location: 14278 - 15687 (-)
Gene ID: HRGMv2_3678_18_13
Type: pfam
Location: 15934 - 16653 (-)
Gene ID: HRGMv2_3678_18_14
Type: TF
Location: 16736 - 18331 (-)
Gene ID: HRGMv2_3678_18_15
Type: TC
Location: 18358 - 19848 (-)
Gene ID: HRGMv2_3678_18_16
Type: pfam
Location: 20468 - 21763 (+)
Gene ID: HRGMv2_3678_18_17
Type: TC
Location: 21932 - 23257 (-)
Gene ID: HRGMv2_3678_18_18
Type: pfam
Location: 23284 - 24546 (-)
Gene ID: HRGMv2_3678_18_19
Type: TC
Location: 24691 - 25902 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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