Cluster: HRGMv2_3678_CGC21
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3678
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3678_11 | HRGMv2_3678_11_66 | 78298 | 79557 | + | 2.A.1.14.3 |
| CAZyme | HRGMv2_3678_11 | HRGMv2_3678_11_67 | 79635 | 81041 | + | AA4 |
| NULL(UNKNOWN) | HRGMv2_3678_11 | HRGMv2_3678_11_68 | 81567 | 82475 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3678_11 | HRGMv2_3678_11_69 | 82555 | 84444 | - | 2.A.114.1.5 |
Gene ID: HRGMv2_3678_11_66
Type: TC
Location: 78298 - 79557 (+)
Type: TC
Location: 78298 - 79557 (+)
Gene ID: HRGMv2_3678_11_67
Type: CAZyme
Location: 79635 - 81041 (+)
Type: CAZyme
Location: 79635 - 81041 (+)
Gene ID: HRGMv2_3678_11_68
Type:
Location: 81567 - 82475 (-)
Type:
Location: 81567 - 82475 (-)
Gene ID: HRGMv2_3678_11_69
Type: TC
Location: 82555 - 84444 (-)
Type: TC
Location: 82555 - 84444 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Caecibacter
Species
Caecibacter sp003467125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.