Cluster: HRGMv2_3678_CGC20
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3678
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3678_11 | HRGMv2_3678_11_4 | 3389 | 4927 | + | 2.A.14.1.3 |
| CAZyme | HRGMv2_3678_11 | HRGMv2_3678_11_5 | 5004 | 6425 | + | AA4 |
| pfam | HRGMv2_3678_11 | HRGMv2_3678_11_6 | 6626 | 7909 | + | Lar_N | LarA_C |
| pfam | HRGMv2_3678_11 | HRGMv2_3678_11_7 | 7991 | 8302 | - | DUF6506 |
| TC | HRGMv2_3678_11 | HRGMv2_3678_11_8 | 8496 | 9956 | + | 2.A.21.8.2 |
Gene ID: HRGMv2_3678_11_4
Type: TC
Location: 3389 - 4927 (+)
Type: TC
Location: 3389 - 4927 (+)
Gene ID: HRGMv2_3678_11_5
Type: CAZyme
Location: 5004 - 6425 (+)
Type: CAZyme
Location: 5004 - 6425 (+)
Gene ID: HRGMv2_3678_11_6
Type: pfam
Location: 6626 - 7909 (+)
Type: pfam
Location: 6626 - 7909 (+)
Gene ID: HRGMv2_3678_11_7
Type: pfam
Location: 7991 - 8302 (-)
Type: pfam
Location: 7991 - 8302 (-)
Gene ID: HRGMv2_3678_11_8
Type: TC
Location: 8496 - 9956 (+)
Type: TC
Location: 8496 - 9956 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Caecibacter
Species
Caecibacter sp003467125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.