Cluster: HRGMv2_3678_CGC16
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3678
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3678_7 | HRGMv2_3678_7_88 | 86780 | 87946 | - | GT28 |
| pfam | HRGMv2_3678_7 | HRGMv2_3678_7_89 | 87981 | 89336 | - | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | HRGMv2_3678_7 | HRGMv2_3678_7_90 | 89384 | 90349 | - | 9.B.146.1.6 |
Gene ID: HRGMv2_3678_7_88
Type: CAZyme
Location: 86780 - 87946 (-)
Type: CAZyme
Location: 86780 - 87946 (-)
Gene ID: HRGMv2_3678_7_89
Type: pfam
Location: 87981 - 89336 (-)
Type: pfam
Location: 87981 - 89336 (-)
Gene ID: HRGMv2_3678_7_90
Type: TC
Location: 89384 - 90349 (-)
Type: TC
Location: 89384 - 90349 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Caecibacter
Species
Caecibacter sp003467125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.