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Cluster: HRGMv2_3674_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3674_40 HRGMv2_3674_40_10 10912 11664 - CE6
pfam HRGMv2_3674_40 HRGMv2_3674_40_11 12401 12724 + GFO_IDH_MocA_C
CAZyme HRGMv2_3674_40 HRGMv2_3674_40_12 13391 15283 + GH20
CAZyme HRGMv2_3674_40 HRGMv2_3674_40_13 15314 16480 + CE9
NULL(UNKNOWN) HRGMv2_3674_40 HRGMv2_3674_40_14 16493 16699 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_3674_40 HRGMv2_3674_40_15 16713 17270 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3674_40 HRGMv2_3674_40_16 17386 18258 + 3.A.1.1.10
TC HRGMv2_3674_40 HRGMv2_3674_40_17 18270 19157 + 3.A.1.1.29
NULL(UNKNOWN) HRGMv2_3674_40 HRGMv2_3674_40_18 19195 21024 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3674_40 HRGMv2_3674_40_19 21056 22102 + GH105
Gene ID: HRGMv2_3674_40_10
Type: CAZyme
Location: 10912 - 11664 (-)
Gene ID: HRGMv2_3674_40_11
Type: pfam
Location: 12401 - 12724 (+)
Gene ID: HRGMv2_3674_40_12
Type: CAZyme
Location: 13391 - 15283 (+)
Gene ID: HRGMv2_3674_40_13
Type: CAZyme
Location: 15314 - 16480 (+)
Gene ID: HRGMv2_3674_40_14
Type:
Location: 16493 - 16699 (+)
Gene ID: HRGMv2_3674_40_15
Type:
Location: 16713 - 17270 (+)
Gene ID: HRGMv2_3674_40_16
Type: TC
Location: 17386 - 18258 (+)
Gene ID: HRGMv2_3674_40_17
Type: TC
Location: 18270 - 19157 (+)
Gene ID: HRGMv2_3674_40_18
Type:
Location: 19195 - 21024 (+)
Gene ID: HRGMv2_3674_40_19
Type: CAZyme
Location: 21056 - 22102 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
UMGS1883
→
Family
UMGS1883
→
Genus
UMGS1883
→
Species
UMGS1883 sp905195005

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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