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PROTEIN: HRGMv2_3674_40_18

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Protein File & Metadata
Download PDB File
Source:
HRGMv2_3674_40_18.pdb
Genome ID:
HRGMv2_3674
Protein ID:
HRGMv2_3674_40_18

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Detailed structural information will appear here after analysis...

Protein Sequence 
MKKTLALIIS   IVLVVGGVFA   GCGKKEKTIT   LGENDKYVPT   DELSVEMWYT   QGTDYAVGSG 60
VSDDVVKKWV   EERTLVKIDN   IYGNDGGQWD   TKLSRLVAGD   NLPQMIICDA   GQGPSHFAKL 120
QENDLIWEIT   DEMLEKYAPN   YLKRIEKGAL   DDFRIDGKLY   GLPFNQKATS   VSVPGIDEET 180
LTNISEYIEG   ITSDDQMCLW   IRDDILKMIY   PECKSWDEIE   KAAKEGKPIA   DMCFDIPINT 240
KEELVDFFYK   IKKLNLKTEN   NKPVYAFGYS   GGDNWEALTY   LGAYMEGYAP   YNYAAAWNTK 300
KQEMTVPLVS   DMCKDAVAIQ   NKMIRDKVID   PESLVHTIDL   YKEKALNGQY   AIYAPGYAGY 360
ADNINPMLKE   NNASYRIRPF   VVNIPNNDEY   QPTKPVETPG   DWETSVCITK   KASEAEVVQL 420
LNYINVCSSE   EFDEVYWWGP   KDAGLYKEEN   GKRAYVDNAF   NERFINGNSG   ALDDKNTKGI 480
GMAASKTGMF   YITPVKPEQN   EFAPNIYNKT   FKLSAYSAVI   KFTADSPHAI   TAPGPTTNVW 540
SSQYAAIPEC   VTYWANREKW   ENAFKMVYTA   SSDAEFEKKW   KEAVKTLDSV   VNVKKMEKEM 600
TAAAKEELK 609
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A133CZN8-F1-model_v4 21 607 21 502 0.6203 0.722
AF-A0A133D019-F1-model_v4 1 607 8 485 0.6036 0.6978
AF-Q8DRJ6-F1-model_v4 1 609 29 514 0.5993 0.7005
AF-Q8DNU2-F1-model_v4 34 599 33 445 0.5929 0.7441
AF-A0A0H3GX53-F1-model_v4 32 596 20 427 0.5927 0.7387
AF-K0F7X1-F1-model_v4 22 592 24 409 0.5867 0.75
AF-Q7CPK0-F1-model_v4 39 595 21 433 0.5856 0.7291
AF-Q32AT3-F1-model_v4 38 596 20 433 0.5837 0.7257
AF-P0AG80-F1-model_v4 38 595 20 433 0.582 0.7237
AF-A0A0H3H458-F1-model_v4 38 596 20 433 0.5806 0.7218
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 27 609 36 506 0.6635 0.7893
AF-A0A7U1BNH7-F1-model_v4 GH10 32 601 25 742 0.4504 0.535
A0A9Q8PNJ5 GH4 15 596 55 866 0.4241 0.5242
UJP10085.1 GH154 1 576 201 1171 0.3453 0.506
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 27 609 36 506 0.6635 0.7893
A0A7U1BNH7 GH10 32 601 25 742 0.4504 0.535
A0A9Q8PNJ5 GH4 15 596 55 866 0.4241 0.5242
UJP10085.1 GH154 1 576 201 1171 0.3453 0.506
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
3vlw-assembly2.cif.gz_B 32 609 1 489 0.7125 0.806
5h6u-assembly1.cif.gz_A 36 609 2 487 0.7099 0.8056
4tqu-assembly1.cif.gz_Q 32 609 1 492 0.7062 0.7969
6jhx-assembly2.cif.gz_B 32 606 1 483 0.7059 0.802
5g62-assembly2.cif.gz_B 41 609 1 489 0.7043 0.7974
5xs8-assembly1.cif.gz_A 41 604 1 474 0.7001 0.8023
6fth-assembly1.cif.gz_A 28 609 1 496 0.6664 0.7518
3omb-assembly1.cif.gz_A 27 609 1 503 0.6578 0.7381
5g5y-assembly1.cif.gz_A 32 609 1 491 0.6415 0.7295
5swa-assembly1.cif.gz_A 42 609 1 448 0.6123 0.7211
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A0H2URD6-F1-model_v4 17 609 19 535 0.6595 0.7452
AF-P37966-F1-model_v4 31 606 28 502 0.6403 0.7538
AF-Q2YKZ9-F1-model_v4 28 596 21 411 0.604 0.7653
AF-Q578M8-F1-model_v4 28 596 21 411 0.6025 0.7635
AF-Q8FVS7-F1-model_v4 28 596 21 411 0.6022 0.7626
AF-Q795R2-F1-model_v4 8 606 4 498 0.5928 0.674
AF-Q7CPK0-F1-model_v4 39 595 21 433 0.5856 0.7291
AF-Q5PJK8-F1-model_v4 39 595 21 433 0.5842 0.7276
AF-Q57IS0-F1-model_v4 39 596 21 433 0.5841 0.7275
AF-Q8XG55-F1-model_v4 39 595 21 433 0.584 0.7275
Download Full SwissProt Results