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Cluster: HRGMv2_3658_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3658_16 HRGMv2_3658_16_31 36350 38188 + 3.A.1.135.5
TC HRGMv2_3658_16 HRGMv2_3658_16_32 38204 39919 + 3.A.1.135.5
CAZyme HRGMv2_3658_16 HRGMv2_3658_16_33 40056 43229 - CBM32
TF HRGMv2_3658_16 HRGMv2_3658_16_34 43266 44090 - HTH_AraC | HTH_AraC
CAZyme HRGMv2_3658_16 HRGMv2_3658_16_35 44373 45830 + GH32
CAZyme HRGMv2_3658_16 HRGMv2_3658_16_36 45846 47270 + CBM66 | CBM66
NULL(UNKNOWN) HRGMv2_3658_16 HRGMv2_3658_16_37 47324 48187 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3658_16 HRGMv2_3658_16_38 48275 50053 + GH32
CAZyme HRGMv2_3658_16 HRGMv2_3658_16_39 50067 52199 + GH32
Gene ID: HRGMv2_3658_16_31
Type: TC
Location: 36350 - 38188 (+)
Gene ID: HRGMv2_3658_16_32
Type: TC
Location: 38204 - 39919 (+)
Gene ID: HRGMv2_3658_16_33
Type: CAZyme
Location: 40056 - 43229 (-)
Gene ID: HRGMv2_3658_16_34
Type: TF
Location: 43266 - 44090 (-)
Gene ID: HRGMv2_3658_16_35
Type: CAZyme
Location: 44373 - 45830 (+)
Gene ID: HRGMv2_3658_16_36
Type: CAZyme
Location: 45846 - 47270 (+)
Gene ID: HRGMv2_3658_16_37
Type:
Location: 47324 - 48187 (+)
Gene ID: HRGMv2_3658_16_38
Type: CAZyme
Location: 48275 - 50053 (+)
Gene ID: HRGMv2_3658_16_39
Type: CAZyme
Location: 50067 - 52199 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
UBA1212
→
Family
UBA1255
→
Genus
UMGS1851
→
Species
UMGS1851 sp900555605

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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