PROTEIN: HRGMv2_3658_16_37
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Protein File & Metadata
Source:
HRGMv2_3658_16_37.pdb
Genome ID:
Protein ID:
HRGMv2_3658_16_37
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Protein Sequence
MRKNRYMKVL AVLLTVLLAG GIAASAEYTA EFDDWYGASG SWEETDEGWY GEGGQNGYYI 60 SNIQVSGKQD FTIAVSVTED PSHAVAGAGI AVLEDDLYPE AVWYCFQVQA SDGSVTMFHI 120 EDGVMEWQEN ASLSDEQKAL ETHQVKLVYT AATHTLEGYV DDTLLITKVD ENFGGWLALK 180 RYEAPAVFSE IVYTGAEAPT PVPVTPTPDV TEAPATETPS AGNDPTEMPS ASSGADKTTA 240 PQKTSAPGQE DAEEAGVNVT VVVLVAVAVV LAAGILTFII VKKKSKS 287
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-U7Q4H7-F1-model_v4 | 14 | 258 | 13 | 255 | 0.4325 |
0.6265 |
| AF-A0A0R0GGF4-F1-model_v4 | 23 | 248 | 20 | 682 | 0.3781 |
0.6685 |
| AF-Q9LFH9-F1-model_v4 | 23 | 237 | 19 | 589 | 0.3742 |
0.7002 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A6F8XJ04-F1-model_v4 | CBM66 | 1 | 272 | 15 | 217 | 0.5941 |
0.7827 |
| WGP08706.1 | CBM66 | 27 | 268 | 1 | 183 | 0.553 |
0.7676 |
| BCS89112.1 | GH16 | 1 | 267 | 10 | 279 | 0.5158 |
0.5663 |
| AF-A0A5K1K664-F1-model_v4 | GH16_1 | 1 | 257 | 4 | 328 | 0.4818 |
0.6276 |
| AF-A0A810N5E0-F1-model_v4 | CBM66 , PL3_4 | 1 | 250 | 20 | 341 | 0.4806 |
0.6822 |
| AF-A0A810NXV7-F1-model_v4 | CBM66 , PL3_4 | 1 | 258 | 20 | 393 | 0.4792 |
0.6628 |
| AF-I0GXB6-F1-model_v4 | CBM66 , PL3_4 | 1 | 255 | 27 | 479 | 0.4719 |
0.6823 |
| UVF18413.1 | GH16 | 28 | 197 | 1 | 245 | 0.4719 |
0.7562 |
| AF-D9TFH3-F1-model_v4 | CBM66 , PL3_1 | 6 | 268 | 19 | 273 | 0.4663 |
0.6388 |
| QZY55299.1 | CBM66 | 19 | 217 | 67 | 349 | 0.4656 |
0.8137 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WGP08706.1 | CBM66 | 27 | 268 | 1 | 183 | 0.553 |
0.7676 |
| BCS89112.1 | GH16 | 1 | 267 | 10 | 279 | 0.5158 |
0.5663 |
| UKN00445.1 | GH16 | 22 | 262 | 25 | 253 | 0.5157 |
0.6166 |
| A0A974XCN5 | GH16 | 24 | 203 | 59 | 276 | 0.4914 |
0.7582 |
| A0A5K1K664 | GH16_1 | 1 | 257 | 4 | 328 | 0.4818 |
0.6276 |
| A0A810N5E0 | CBM66 , PL3_4 | 1 | 250 | 20 | 341 | 0.4806 |
0.6822 |
| I0GXB6 | CBM66 , PL3_4 | 1 | 255 | 27 | 479 | 0.4719 |
0.6823 |
| UVF18413.1 | GH16 | 28 | 197 | 1 | 245 | 0.4719 |
0.7562 |
| QZY55299.1 | CBM66 | 19 | 217 | 67 | 349 | 0.4656 |
0.8137 |
| BCJ43814.1 | CBM66 , PL3_4 | 22 | 263 | 43 | 485 | 0.4468 |
0.6666 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4b1m-assembly3.cif.gz_C | 29 | 195 | 3 | 161 | 0.6729 |
0.887 |
| 7qs5-assembly2.cif.gz_B | 23 | 192 | 1 | 163 | 0.5973 |
0.7806 |
| 3d6e-assembly1.cif.gz_A | 26 | 196 | 4 | 185 | 0.5809 |
0.7762 |
| 3d6e-assembly2.cif.gz_B | 26 | 196 | 4 | 186 | 0.5794 |
0.7762 |
| 5zbt-assembly1.cif.gz_A | 24 | 196 | 1 | 211 | 0.5789 |
0.8189 |
| 1dhk-assembly1.cif.gz_B-2 | 25 | 197 | 3 | 195 | 0.5787 |
0.7851 |
| 5dze-assembly1.cif.gz_A | 27 | 200 | 1 | 199 | 0.578 |
0.7884 |
| 7exo-assembly1.cif.gz_A | 29 | 196 | 1 | 207 | 0.578 |
0.8296 |
| 5sv8-assembly1.cif.gz_A | 27 | 200 | 1 | 198 | 0.5765 |
0.7845 |
| 1viw-assembly1.cif.gz_B | 25 | 263 | 3 | 198 | 0.5752 |
0.7031 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0P0VIP0-F1-model_v4 | 12 | 249 | 25 | 670 | 0.4237 |
0.7107 |
| AF-Q9LFH9-F1-model_v4 | 23 | 237 | 19 | 589 | 0.3742 |
0.7002 |