Cluster: HRGMv2_3651_CGC7
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3651
- CGC Family ID: CGCFAM_08769
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3651_1 | HRGMv2_3651_1_449 | 501971 | 503278 | - | GH3 |
| pfam | HRGMv2_3651_1 | HRGMv2_3651_1_450 | 503377 | 503781 | + | 4HBT | 4HBT_2 | Acyl-ACP_TE_C |
| TC | HRGMv2_3651_1 | HRGMv2_3651_1_451 | 503798 | 504622 | - | 3.A.1.132.3 |
Gene ID: HRGMv2_3651_1_449
Type: CAZyme
Location: 501971 - 503278 (-)
Type: CAZyme
Location: 501971 - 503278 (-)
Gene ID: HRGMv2_3651_1_450
Type: pfam
Location: 503377 - 503781 (+)
Type: pfam
Location: 503377 - 503781 (+)
Gene ID: HRGMv2_3651_1_451
Type: TC
Location: 503798 - 504622 (-)
Type: TC
Location: 503798 - 504622 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.