Cluster: HRGMv2_3651_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3651
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3651_1 | HRGMv2_3651_1_210 | 223964 | 224848 | + | GT2 |
| NULL(UNKNOWN) | HRGMv2_3651_1 | HRGMv2_3651_1_211 | 224881 | 225087 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_3651_1 | HRGMv2_3651_1_212 | 225551 | 226063 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3651_1 | HRGMv2_3651_1_213 | 226086 | 227639 | - | 2.A.50.2.1 |
Gene ID: HRGMv2_3651_1_210
Type: CAZyme
Location: 223964 - 224848 (+)
Type: CAZyme
Location: 223964 - 224848 (+)
Gene ID: HRGMv2_3651_1_211
Type:
Location: 224881 - 225087 (+)
Type:
Location: 224881 - 225087 (+)
Gene ID: HRGMv2_3651_1_212
Type:
Location: 225551 - 226063 (+)
Type:
Location: 225551 - 226063 (+)
Gene ID: HRGMv2_3651_1_213
Type: TC
Location: 226086 - 227639 (-)
Type: TC
Location: 226086 - 227639 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.