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Cluster: HRGMv2_3651_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3651_7 HRGMv2_3651_7_64 80306 80890 - 2.A.51.1.6
TC HRGMv2_3651_7 HRGMv2_3651_7_65 80883 81476 - 2.A.51.1.6
TC HRGMv2_3651_7 HRGMv2_3651_7_66 81487 82323 - 3.A.1.1.45
TC HRGMv2_3651_7 HRGMv2_3651_7_67 82323 83852 - 3.A.1.1.45
TC HRGMv2_3651_7 HRGMv2_3651_7_68 83958 85232 - 3.A.1.1.1
CAZyme HRGMv2_3651_7 HRGMv2_3651_7_69 85439 87004 - GH77
pfam HRGMv2_3651_7 HRGMv2_3651_7_70 87190 88029 - Cu-oxidase_4
pfam HRGMv2_3651_7 HRGMv2_3651_7_71 88026 89747 - DUF5312
TC HRGMv2_3651_7 HRGMv2_3651_7_72 90094 91341 + 2.A.37.2.2
Gene ID: HRGMv2_3651_7_64
Type: TC
Location: 80306 - 80890 (-)
Gene ID: HRGMv2_3651_7_65
Type: TC
Location: 80883 - 81476 (-)
Gene ID: HRGMv2_3651_7_66
Type: TC
Location: 81487 - 82323 (-)
Gene ID: HRGMv2_3651_7_67
Type: TC
Location: 82323 - 83852 (-)
Gene ID: HRGMv2_3651_7_68
Type: TC
Location: 83958 - 85232 (-)
Gene ID: HRGMv2_3651_7_69
Type: CAZyme
Location: 85439 - 87004 (-)
Gene ID: HRGMv2_3651_7_70
Type: pfam
Location: 87190 - 88029 (-)
Gene ID: HRGMv2_3651_7_71
Type: pfam
Location: 88026 - 89747 (-)
Gene ID: HRGMv2_3651_7_72
Type: TC
Location: 90094 - 91341 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Spirochaetota
→
Class
Spirochaetia
→
Order
Treponematales
→
Family
Treponemataceae
→
Genus
Treponema_D
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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