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Cluster: HRGMv2_3651_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3651_6 HRGMv2_3651_6_87 106548 107897 - 2.A.115.2.14
CAZyme HRGMv2_3651_6 HRGMv2_3651_6_88 108095 111007 + GH13_37
CAZyme HRGMv2_3651_6 HRGMv2_3651_6_89 111202 114561 + GH13_14
CAZyme HRGMv2_3651_6 HRGMv2_3651_6_90 114648 117203 + CBM74
TC HRGMv2_3651_6 HRGMv2_3651_6_91 117506 118405 + 3.A.1.4.10
TC HRGMv2_3651_6 HRGMv2_3651_6_92 118438 119454 + 3.A.1.4.8
TC HRGMv2_3651_6 HRGMv2_3651_6_93 119454 120242 + 3.A.1.4.10
TC HRGMv2_3651_6 HRGMv2_3651_6_94 120267 120974 + 3.A.1.4.10
Gene ID: HRGMv2_3651_6_87
Type: TC
Location: 106548 - 107897 (-)
Gene ID: HRGMv2_3651_6_88
Type: CAZyme
Location: 108095 - 111007 (+)
Gene ID: HRGMv2_3651_6_89
Type: CAZyme
Location: 111202 - 114561 (+)
Gene ID: HRGMv2_3651_6_90
Type: CAZyme
Location: 114648 - 117203 (+)
Gene ID: HRGMv2_3651_6_91
Type: TC
Location: 117506 - 118405 (+)
Gene ID: HRGMv2_3651_6_92
Type: TC
Location: 118438 - 119454 (+)
Gene ID: HRGMv2_3651_6_93
Type: TC
Location: 119454 - 120242 (+)
Gene ID: HRGMv2_3651_6_94
Type: TC
Location: 120267 - 120974 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Spirochaetota
→
Class
Spirochaetia
→
Order
Treponematales
→
Family
Treponemataceae
→
Genus
Treponema_D
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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