Cluster: HRGMv2_3651_CGC13
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3651
- CGC Family ID: CGCFAM_01065
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3651_4 | HRGMv2_3651_4_36 | 33373 | 35091 | - | 2.A.53.3.9 |
| pfam | HRGMv2_3651_4 | HRGMv2_3651_4_37 | 35185 | 35865 | + | DTW |
| CAZyme | HRGMv2_3651_4 | HRGMv2_3651_4_38 | 35855 | 37531 | - | GH3 |
Gene ID: HRGMv2_3651_4_36
Type: TC
Location: 33373 - 35091 (-)
Type: TC
Location: 33373 - 35091 (-)
Gene ID: HRGMv2_3651_4_37
Type: pfam
Location: 35185 - 35865 (+)
Type: pfam
Location: 35185 - 35865 (+)
Gene ID: HRGMv2_3651_4_38
Type: CAZyme
Location: 35855 - 37531 (-)
Type: CAZyme
Location: 35855 - 37531 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.