Cluster: HRGMv2_3651_CGC12
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3651
- CGC Family ID: CGCFAM_02524
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3651_4 | HRGMv2_3651_4_15 | 10916 | 13471 | - | GT51 |
| NULL(UNKNOWN) | HRGMv2_3651_4 | HRGMv2_3651_4_16 | 13907 | 14890 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3651_4 | HRGMv2_3651_4_17 | 14900 | 15832 | - | 1.A.34.1.1 |
Gene ID: HRGMv2_3651_4_15
Type: CAZyme
Location: 10916 - 13471 (-)
Type: CAZyme
Location: 10916 - 13471 (-)
Gene ID: HRGMv2_3651_4_16
Type:
Location: 13907 - 14890 (-)
Type:
Location: 13907 - 14890 (-)
Gene ID: HRGMv2_3651_4_17
Type: TC
Location: 14900 - 15832 (-)
Type: TC
Location: 14900 - 15832 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.