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Cluster: HRGMv2_3651_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3651_3 HRGMv2_3651_3_130 134620 135276 - GT4
CAZyme HRGMv2_3651_3 HRGMv2_3651_3_131 135328 136083 - GT4
pfam HRGMv2_3651_3 HRGMv2_3651_3_132 136058 136540 - Glyco_transf_4 | Glyco_trans_4_2 | Glyco_trans_4_4
CAZyme HRGMv2_3651_3 HRGMv2_3651_3_133 136542 137345 - GT2
CAZyme HRGMv2_3651_3 HRGMv2_3651_3_134 137342 138262 - GT2
NULL(UNKNOWN) HRGMv2_3651_3 HRGMv2_3651_3_135 138255 139469 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_3651_3 HRGMv2_3651_3_136 139470 140714 - Glyphos_transf
TC HRGMv2_3651_3 HRGMv2_3651_3_137 140707 142188 - 2.A.66.2.22
Gene ID: HRGMv2_3651_3_130
Type: CAZyme
Location: 134620 - 135276 (-)
Gene ID: HRGMv2_3651_3_131
Type: CAZyme
Location: 135328 - 136083 (-)
Gene ID: HRGMv2_3651_3_132
Type: pfam
Location: 136058 - 136540 (-)
Gene ID: HRGMv2_3651_3_133
Type: CAZyme
Location: 136542 - 137345 (-)
Gene ID: HRGMv2_3651_3_134
Type: CAZyme
Location: 137342 - 138262 (-)
Gene ID: HRGMv2_3651_3_135
Type:
Location: 138255 - 139469 (-)
Gene ID: HRGMv2_3651_3_136
Type: pfam
Location: 139470 - 140714 (-)
Gene ID: HRGMv2_3651_3_137
Type: TC
Location: 140707 - 142188 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Spirochaetota
→
Class
Spirochaetia
→
Order
Treponematales
→
Family
Treponemataceae
→
Genus
Treponema_D
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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