Cluster: HRGMv2_3649_CGC26
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3649
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3649_43 | HRGMv2_3649_43_1 | 92 | 2101 | - | 3.A.11.3.1 |
| pfam | HRGMv2_3649_43 | HRGMv2_3649_43_2 | 2091 | 2960 | - | UDG |
| CAZyme | HRGMv2_3649_43 | HRGMv2_3649_43_3 | 2912 | 4138 | - | GT4 |
Gene ID: HRGMv2_3649_43_1
Type: TC
Location: 92 - 2101 (-)
Type: TC
Location: 92 - 2101 (-)
Gene ID: HRGMv2_3649_43_2
Type: pfam
Location: 2091 - 2960 (-)
Type: pfam
Location: 2091 - 2960 (-)
Gene ID: HRGMv2_3649_43_3
Type: CAZyme
Location: 2912 - 4138 (-)
Type: CAZyme
Location: 2912 - 4138 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.