Cluster: HRGMv2_3649_CGC24
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3649
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3649_37 | HRGMv2_3649_37_17 | 13900 | 15291 | - | GH30_1 |
| TC | HRGMv2_3649_37 | HRGMv2_3649_37_18 | 15294 | 16322 | - | 3.A.1.1.11 |
| TC | HRGMv2_3649_37 | HRGMv2_3649_37_19 | 16372 | 17286 | - | 3.A.1.1.11 |
Gene ID: HRGMv2_3649_37_17
Type: CAZyme
Location: 13900 - 15291 (-)
Type: CAZyme
Location: 13900 - 15291 (-)
Gene ID: HRGMv2_3649_37_18
Type: TC
Location: 15294 - 16322 (-)
Type: TC
Location: 15294 - 16322 (-)
Gene ID: HRGMv2_3649_37_19
Type: TC
Location: 16372 - 17286 (-)
Type: TC
Location: 16372 - 17286 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.