Cluster: HRGMv2_3649_CGC15
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3649
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3649_19 | HRGMv2_3649_19_35 | 42403 | 43047 | - | 1.A.16.5.1 |
| CAZyme | HRGMv2_3649_19 | HRGMv2_3649_19_36 | 43223 | 45241 | + | GH77 |
| CAZyme | HRGMv2_3649_19 | HRGMv2_3649_19_37 | 45269 | 48913 | + | GH13 |
Gene ID: HRGMv2_3649_19_35
Type: TC
Location: 42403 - 43047 (-)
Type: TC
Location: 42403 - 43047 (-)
Gene ID: HRGMv2_3649_19_36
Type: CAZyme
Location: 43223 - 45241 (+)
Type: CAZyme
Location: 43223 - 45241 (+)
Gene ID: HRGMv2_3649_19_37
Type: CAZyme
Location: 45269 - 48913 (+)
Type: CAZyme
Location: 45269 - 48913 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.