Cluster: HRGMv2_3649_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3649
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3649_1 | HRGMv2_3649_1_74 | 73925 | 75229 | - | 1.B.9.2.4 |
| pfam | HRGMv2_3649_1 | HRGMv2_3649_1_75 | 75353 | 76249 | - | EamA | EamA |
| CAZyme | HRGMv2_3649_1 | HRGMv2_3649_1_76 | 76381 | 78828 | - | GT35 |
| CAZyme | HRGMv2_3649_1 | HRGMv2_3649_1_77 | 78932 | 81070 | - | GH13_11 |
Gene ID: HRGMv2_3649_1_74
Type: TC
Location: 73925 - 75229 (-)
Type: TC
Location: 73925 - 75229 (-)
Gene ID: HRGMv2_3649_1_75
Type: pfam
Location: 75353 - 76249 (-)
Type: pfam
Location: 75353 - 76249 (-)
Gene ID: HRGMv2_3649_1_76
Type: CAZyme
Location: 76381 - 78828 (-)
Type: CAZyme
Location: 76381 - 78828 (-)
Gene ID: HRGMv2_3649_1_77
Type: CAZyme
Location: 78932 - 81070 (-)
Type: CAZyme
Location: 78932 - 81070 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.