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Cluster: HRGMv2_3645_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3645_2 HRGMv2_3645_2_75 75723 77318 - CBM91 | GH43_11
TC HRGMv2_3645_2 HRGMv2_3645_2_76 77343 78182 - 3.A.1.1.34
TC HRGMv2_3645_2 HRGMv2_3645_2_77 78198 79157 - 3.A.1.1.4
STP HRGMv2_3645_2 HRGMv2_3645_2_78 79259 80563 - SBP_bac_1
CAZyme HRGMv2_3645_2 HRGMv2_3645_2_79 80846 83272 + GH94
STP HRGMv2_3645_2 HRGMv2_3645_2_80 83360 84046 + Pribosyltran
TC HRGMv2_3645_2 HRGMv2_3645_2_81 84047 84889 + 3.A.1.14.19
TC HRGMv2_3645_2 HRGMv2_3645_2_82 84898 85866 + 3.A.1.14.19
TC HRGMv2_3645_2 HRGMv2_3645_2_83 85854 86624 + 3.A.1.14.6
pfam HRGMv2_3645_2 HRGMv2_3645_2_84 86669 87415 + PseudoU_synth_2
pfam HRGMv2_3645_2 HRGMv2_3645_2_85 87485 88135 + Cytidylate_kin2
TC HRGMv2_3645_2 HRGMv2_3645_2_86 88130 89395 - 9.A.40.2.4
TC HRGMv2_3645_2 HRGMv2_3645_2_87 89392 90666 - 9.A.40.2.1
Gene ID: HRGMv2_3645_2_75
Type: CAZyme
Location: 75723 - 77318 (-)
Gene ID: HRGMv2_3645_2_76
Type: TC
Location: 77343 - 78182 (-)
Gene ID: HRGMv2_3645_2_77
Type: TC
Location: 78198 - 79157 (-)
Gene ID: HRGMv2_3645_2_78
Type: STP
Location: 79259 - 80563 (-)
Gene ID: HRGMv2_3645_2_79
Type: CAZyme
Location: 80846 - 83272 (+)
Gene ID: HRGMv2_3645_2_80
Type: STP
Location: 83360 - 84046 (+)
Gene ID: HRGMv2_3645_2_81
Type: TC
Location: 84047 - 84889 (+)
Gene ID: HRGMv2_3645_2_82
Type: TC
Location: 84898 - 85866 (+)
Gene ID: HRGMv2_3645_2_83
Type: TC
Location: 85854 - 86624 (+)
Gene ID: HRGMv2_3645_2_84
Type: pfam
Location: 86669 - 87415 (+)
Gene ID: HRGMv2_3645_2_85
Type: pfam
Location: 87485 - 88135 (+)
Gene ID: HRGMv2_3645_2_86
Type: TC
Location: 88130 - 89395 (-)
Gene ID: HRGMv2_3645_2_87
Type: TC
Location: 89392 - 90666 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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