Cluster: HRGMv2_3645_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3645
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3645_2 | HRGMv2_3645_2_59 | 58978 | 60039 | - | 3.A.23.1.1 |
| CAZyme | HRGMv2_3645_2 | HRGMv2_3645_2_60 | 60046 | 60786 | - | GT26 |
| pfam | HRGMv2_3645_2 | HRGMv2_3645_2_61 | 60788 | 61597 | - | Methyltrans_RNA |
| TC | HRGMv2_3645_2 | HRGMv2_3645_2_62 | 61594 | 63048 | - | 9.B.174.1.1 |
Gene ID: HRGMv2_3645_2_59
Type: TC
Location: 58978 - 60039 (-)
Type: TC
Location: 58978 - 60039 (-)
Gene ID: HRGMv2_3645_2_60
Type: CAZyme
Location: 60046 - 60786 (-)
Type: CAZyme
Location: 60046 - 60786 (-)
Gene ID: HRGMv2_3645_2_61
Type: pfam
Location: 60788 - 61597 (-)
Type: pfam
Location: 60788 - 61597 (-)
Gene ID: HRGMv2_3645_2_62
Type: TC
Location: 61594 - 63048 (-)
Type: TC
Location: 61594 - 63048 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D succinifaciens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.