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Cluster: HRGMv2_3645_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3645_1 HRGMv2_3645_1_335 363576 364331 - 3.A.1.7.5
TC HRGMv2_3645_1 HRGMv2_3645_1_336 364324 365160 - 3.A.1.7.5
TC HRGMv2_3645_1 HRGMv2_3645_1_337 365169 366020 - 3.A.1.7.5
pfam HRGMv2_3645_1 HRGMv2_3645_1_338 366102 366980 - PBP_like_2 | PBP_like_2
STP HRGMv2_3645_1 HRGMv2_3645_1_339 367154 368203 - SBP_bac_1
TC HRGMv2_3645_1 HRGMv2_3645_1_340 368522 369478 + 3.A.1.34.1
TC HRGMv2_3645_1 HRGMv2_3645_1_341 369537 370499 + 3.A.1.34.1
TC HRGMv2_3645_1 HRGMv2_3645_1_342 370492 371295 + 3.A.1.34.1
pfam HRGMv2_3645_1 HRGMv2_3645_1_343 371303 371563 + TSCPD
TC HRGMv2_3645_1 HRGMv2_3645_1_344 371641 372456 - 3.A.1.1.4
TC HRGMv2_3645_1 HRGMv2_3645_1_345 372453 373337 - 3.A.1.1.4
TC HRGMv2_3645_1 HRGMv2_3645_1_346 373417 374697 - 3.A.1.1.4
CAZyme HRGMv2_3645_1 HRGMv2_3645_1_347 374904 377990 + GH2
Gene ID: HRGMv2_3645_1_335
Type: TC
Location: 363576 - 364331 (-)
Gene ID: HRGMv2_3645_1_336
Type: TC
Location: 364324 - 365160 (-)
Gene ID: HRGMv2_3645_1_337
Type: TC
Location: 365169 - 366020 (-)
Gene ID: HRGMv2_3645_1_338
Type: pfam
Location: 366102 - 366980 (-)
Gene ID: HRGMv2_3645_1_339
Type: STP
Location: 367154 - 368203 (-)
Gene ID: HRGMv2_3645_1_340
Type: TC
Location: 368522 - 369478 (+)
Gene ID: HRGMv2_3645_1_341
Type: TC
Location: 369537 - 370499 (+)
Gene ID: HRGMv2_3645_1_342
Type: TC
Location: 370492 - 371295 (+)
Gene ID: HRGMv2_3645_1_343
Type: pfam
Location: 371303 - 371563 (+)
Gene ID: HRGMv2_3645_1_344
Type: TC
Location: 371641 - 372456 (-)
Gene ID: HRGMv2_3645_1_345
Type: TC
Location: 372453 - 373337 (-)
Gene ID: HRGMv2_3645_1_346
Type: TC
Location: 373417 - 374697 (-)
Gene ID: HRGMv2_3645_1_347
Type: CAZyme
Location: 374904 - 377990 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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