Cluster: HRGMv2_3645_CGC4
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3645
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3645_1 | HRGMv2_3645_1_274 | 293465 | 295027 | - | 2.A.16.2.2 |
| peptidase | HRGMv2_3645_1 | HRGMv2_3645_1_275 | 295345 | 296910 | - | S16.UNW |
| CAZyme | HRGMv2_3645_1 | HRGMv2_3645_1_276 | 296952 | 298199 | + | GT104 |
Gene ID: HRGMv2_3645_1_274
Type: TC
Location: 293465 - 295027 (-)
Type: TC
Location: 293465 - 295027 (-)
Gene ID: HRGMv2_3645_1_275
Type: peptidase
Location: 295345 - 296910 (-)
Type: peptidase
Location: 295345 - 296910 (-)
Gene ID: HRGMv2_3645_1_276
Type: CAZyme
Location: 296952 - 298199 (+)
Type: CAZyme
Location: 296952 - 298199 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D succinifaciens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.