Cluster: HRGMv2_3645_CGC26
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3645
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3645_13 | HRGMv2_3645_13_21 | 22337 | 22783 | - | 4.A.2.1.4 |
| TF | HRGMv2_3645_13 | HRGMv2_3645_13_22 | 22871 | 23758 | - | HTH_AraC |
| CAZyme | HRGMv2_3645_13 | HRGMv2_3645_13_23 | 23905 | 26676 | + | GH3 |
Gene ID: HRGMv2_3645_13_21
Type: TC
Location: 22337 - 22783 (-)
Type: TC
Location: 22337 - 22783 (-)
Gene ID: HRGMv2_3645_13_22
Type: TF
Location: 22871 - 23758 (-)
Type: TF
Location: 22871 - 23758 (-)
Gene ID: HRGMv2_3645_13_23
Type: CAZyme
Location: 23905 - 26676 (+)
Type: CAZyme
Location: 23905 - 26676 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D succinifaciens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.