Cluster: HRGMv2_3645_CGC22
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3645
- CGC Family ID: CGCFAM_04094
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3645_10 | HRGMv2_3645_10_27 | 23788 | 25419 | - | 9.B.106.2.2 |
| pfam | HRGMv2_3645_10 | HRGMv2_3645_10_28 | 25439 | 26455 | - | Metallophos |
| STP | HRGMv2_3645_10 | HRGMv2_3645_10_29 | 26457 | 26801 | - | FHA |
| CAZyme | HRGMv2_3645_10 | HRGMv2_3645_10_30 | 27377 | 28054 | - | GT4 |
Gene ID: HRGMv2_3645_10_27
Type: TC
Location: 23788 - 25419 (-)
Type: TC
Location: 23788 - 25419 (-)
Gene ID: HRGMv2_3645_10_28
Type: pfam
Location: 25439 - 26455 (-)
Type: pfam
Location: 25439 - 26455 (-)
Gene ID: HRGMv2_3645_10_29
Type: STP
Location: 26457 - 26801 (-)
Type: STP
Location: 26457 - 26801 (-)
Gene ID: HRGMv2_3645_10_30
Type: CAZyme
Location: 27377 - 28054 (-)
Type: CAZyme
Location: 27377 - 28054 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D succinifaciens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.