Cluster: HRGMv2_3645_CGC21
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3645
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3645_8 | HRGMv2_3645_8_59 | 63535 | 67179 | - | GH13 |
| CAZyme | HRGMv2_3645_8 | HRGMv2_3645_8_60 | 67207 | 69225 | - | GH77 |
| TC | HRGMv2_3645_8 | HRGMv2_3645_8_61 | 69484 | 70128 | + | 1.A.16.5.1 |
Gene ID: HRGMv2_3645_8_59
Type: CAZyme
Location: 63535 - 67179 (-)
Type: CAZyme
Location: 63535 - 67179 (-)
Gene ID: HRGMv2_3645_8_60
Type: CAZyme
Location: 67207 - 69225 (-)
Type: CAZyme
Location: 67207 - 69225 (-)
Gene ID: HRGMv2_3645_8_61
Type: TC
Location: 69484 - 70128 (+)
Type: TC
Location: 69484 - 70128 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D succinifaciens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.