Cluster: HRGMv2_3645_CGC20
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3645
- CGC Family ID: CGCFAM_07342
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3645_7 | HRGMv2_3645_7_114 | 137072 | 138370 | + | 2.A.66.1.33 |
| NULL(UNKNOWN) | HRGMv2_3645_7 | HRGMv2_3645_7_115 | 138670 | 139173 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_3645_7 | HRGMv2_3645_7_116 | 139181 | 140743 | + | SPOR |
| CAZyme | HRGMv2_3645_7 | HRGMv2_3645_7_117 | 140899 | 142911 | + | CBM61 | GH53 |
Gene ID: HRGMv2_3645_7_114
Type: TC
Location: 137072 - 138370 (+)
Type: TC
Location: 137072 - 138370 (+)
Gene ID: HRGMv2_3645_7_115
Type:
Location: 138670 - 139173 (+)
Type:
Location: 138670 - 139173 (+)
Gene ID: HRGMv2_3645_7_116
Type: pfam
Location: 139181 - 140743 (+)
Type: pfam
Location: 139181 - 140743 (+)
Gene ID: HRGMv2_3645_7_117
Type: CAZyme
Location: 140899 - 142911 (+)
Type: CAZyme
Location: 140899 - 142911 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D succinifaciens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.