Cluster: HRGMv2_3645_CGC2
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3645
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3645_1 | HRGMv2_3645_1_149 | 156703 | 158640 | - | 4.C.1.1.14 |
| pfam | HRGMv2_3645_1 | HRGMv2_3645_1_150 | 158776 | 159438 | + | FtsJ |
| CAZyme | HRGMv2_3645_1 | HRGMv2_3645_1_151 | 159447 | 160445 | + | CBM50 |
Gene ID: HRGMv2_3645_1_149
Type: TC
Location: 156703 - 158640 (-)
Type: TC
Location: 156703 - 158640 (-)
Gene ID: HRGMv2_3645_1_150
Type: pfam
Location: 158776 - 159438 (+)
Type: pfam
Location: 158776 - 159438 (+)
Gene ID: HRGMv2_3645_1_151
Type: CAZyme
Location: 159447 - 160445 (+)
Type: CAZyme
Location: 159447 - 160445 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D succinifaciens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.