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Cluster: HRGMv2_3645_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3645_3 HRGMv2_3645_3_35 28629 29006 - 9.B.55.2.1
TC HRGMv2_3645_3 HRGMv2_3645_3_36 29026 29754 - 3.A.1.122.14
pfam HRGMv2_3645_3 HRGMv2_3645_3_37 30302 31879 + tRNA-synt_1c | Anticodon_2
STP HRGMv2_3645_3 HRGMv2_3645_3_38 32549 33808 + Y_Y_Y
TC HRGMv2_3645_3 HRGMv2_3645_3_39 34103 35407 + 2.A.40.7.2
TC HRGMv2_3645_3 HRGMv2_3645_3_40 35589 36086 + 3.A.11.1.4
CAZyme HRGMv2_3645_3 HRGMv2_3645_3_41 36117 38114 - GH31_1
CAZyme HRGMv2_3645_3 HRGMv2_3645_3_42 38245 39645 - GH13_28
Gene ID: HRGMv2_3645_3_35
Type: TC
Location: 28629 - 29006 (-)
Gene ID: HRGMv2_3645_3_36
Type: TC
Location: 29026 - 29754 (-)
Gene ID: HRGMv2_3645_3_37
Type: pfam
Location: 30302 - 31879 (+)
Gene ID: HRGMv2_3645_3_38
Type: STP
Location: 32549 - 33808 (+)
Gene ID: HRGMv2_3645_3_39
Type: TC
Location: 34103 - 35407 (+)
Gene ID: HRGMv2_3645_3_40
Type: TC
Location: 35589 - 36086 (+)
Gene ID: HRGMv2_3645_3_41
Type: CAZyme
Location: 36117 - 38114 (-)
Gene ID: HRGMv2_3645_3_42
Type: CAZyme
Location: 38245 - 39645 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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