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Cluster: HRGMv2_3645_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3645_2 HRGMv2_3645_2_176 191336 193069 - 3.D.10.1.4
pfam HRGMv2_3645_2 HRGMv2_3645_2_177 193138 193938 - LRR_5 | LRR_5 | LRR_8
pfam HRGMv2_3645_2 HRGMv2_3645_2_178 194060 194977 + PseudoU_synth_2
TC HRGMv2_3645_2 HRGMv2_3645_2_179 195081 196100 + 3.A.1.24.2
TC HRGMv2_3645_2 HRGMv2_3645_2_180 196097 196750 + 3.A.1.24.5
pfam HRGMv2_3645_2 HRGMv2_3645_2_181 196747 197985 - DUF763
pfam HRGMv2_3645_2 HRGMv2_3645_2_182 197987 198751 - Methyltrans_RNA
TC HRGMv2_3645_2 HRGMv2_3645_2_183 198753 199982 - 2.A.23.3.4
TC HRGMv2_3645_2 HRGMv2_3645_2_184 200038 200841 - 3.A.1.34.1
TC HRGMv2_3645_2 HRGMv2_3645_2_185 200838 201755 - 3.A.1.34.1
pfam HRGMv2_3645_2 HRGMv2_3645_2_186 201764 202738 - ABC_sub_bind
TC HRGMv2_3645_2 HRGMv2_3645_2_187 202985 204502 - 2.A.21.2.3
TC HRGMv2_3645_2 HRGMv2_3645_2_188 204847 206178 + 3.A.1.1.45
TC HRGMv2_3645_2 HRGMv2_3645_2_189 206322 207170 + 3.A.1.1.45
TC HRGMv2_3645_2 HRGMv2_3645_2_190 207167 208012 + 3.A.1.1.45
TF HRGMv2_3645_2 HRGMv2_3645_2_191 208107 209144 + LacI
CAZyme HRGMv2_3645_2 HRGMv2_3645_2_192 209169 210653 + GH77
CAZyme HRGMv2_3645_2 HRGMv2_3645_2_193 210854 213013 + CBM4 | GH9
Gene ID: HRGMv2_3645_2_176
Type: TC
Location: 191336 - 193069 (-)
Gene ID: HRGMv2_3645_2_177
Type: pfam
Location: 193138 - 193938 (-)
Gene ID: HRGMv2_3645_2_178
Type: pfam
Location: 194060 - 194977 (+)
Gene ID: HRGMv2_3645_2_179
Type: TC
Location: 195081 - 196100 (+)
Gene ID: HRGMv2_3645_2_180
Type: TC
Location: 196097 - 196750 (+)
Gene ID: HRGMv2_3645_2_181
Type: pfam
Location: 196747 - 197985 (-)
Gene ID: HRGMv2_3645_2_182
Type: pfam
Location: 197987 - 198751 (-)
Gene ID: HRGMv2_3645_2_183
Type: TC
Location: 198753 - 199982 (-)
Gene ID: HRGMv2_3645_2_184
Type: TC
Location: 200038 - 200841 (-)
Gene ID: HRGMv2_3645_2_185
Type: TC
Location: 200838 - 201755 (-)
Gene ID: HRGMv2_3645_2_186
Type: pfam
Location: 201764 - 202738 (-)
Gene ID: HRGMv2_3645_2_187
Type: TC
Location: 202985 - 204502 (-)
Gene ID: HRGMv2_3645_2_188
Type: TC
Location: 204847 - 206178 (+)
Gene ID: HRGMv2_3645_2_189
Type: TC
Location: 206322 - 207170 (+)
Gene ID: HRGMv2_3645_2_190
Type: TC
Location: 207167 - 208012 (+)
Gene ID: HRGMv2_3645_2_191
Type: TF
Location: 208107 - 209144 (+)
Gene ID: HRGMv2_3645_2_192
Type: CAZyme
Location: 209169 - 210653 (+)
Gene ID: HRGMv2_3645_2_193
Type: CAZyme
Location: 210854 - 213013 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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