Cluster: HRGMv2_3645_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3645
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3645_2 | HRGMv2_3645_2_159 | 171717 | 172496 | - | 3.A.1.24.5 |
| NULL(UNKNOWN) | HRGMv2_3645_2 | HRGMv2_3645_2_160 | 172689 | 174395 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3645_2 | HRGMv2_3645_2_161 | 174403 | 175359 | - | GH18 |
| TC | HRGMv2_3645_2 | HRGMv2_3645_2_162 | 175379 | 178198 | - | 3.A.12.1.1 |
Gene ID: HRGMv2_3645_2_159
Type: TC
Location: 171717 - 172496 (-)
Type: TC
Location: 171717 - 172496 (-)
Gene ID: HRGMv2_3645_2_160
Type:
Location: 172689 - 174395 (+)
Type:
Location: 172689 - 174395 (+)
Gene ID: HRGMv2_3645_2_161
Type: CAZyme
Location: 174403 - 175359 (-)
Type: CAZyme
Location: 174403 - 175359 (-)
Gene ID: HRGMv2_3645_2_162
Type: TC
Location: 175379 - 178198 (-)
Type: TC
Location: 175379 - 178198 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D succinifaciens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.