Cluster: HRGMv2_3645_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3645
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3645_1 | HRGMv2_3645_1_142 | 148191 | 148958 | - | GH23 |
| NULL(UNKNOWN) | HRGMv2_3645_1 | HRGMv2_3645_1_143 | 149145 | 149639 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | HRGMv2_3645_1 | HRGMv2_3645_1_144 | 149636 | 151606 | - | GGDEF | Peripla_BP_3 |
| TC | HRGMv2_3645_1 | HRGMv2_3645_1_145 | 151732 | 153441 | + | 8.A.7.1.5 |
Gene ID: HRGMv2_3645_1_142
Type: CAZyme
Location: 148191 - 148958 (-)
Type: CAZyme
Location: 148191 - 148958 (-)
Gene ID: HRGMv2_3645_1_143
Type:
Location: 149145 - 149639 (-)
Type:
Location: 149145 - 149639 (-)
Gene ID: HRGMv2_3645_1_144
Type: STP
Location: 149636 - 151606 (-)
Type: STP
Location: 149636 - 151606 (-)
Gene ID: HRGMv2_3645_1_145
Type: TC
Location: 151732 - 153441 (+)
Type: TC
Location: 151732 - 153441 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D succinifaciens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.