Cluster: HRGMv2_3602_CGC2
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 6
- Substrate:
- Genome ID: HRGMv2_3602
- CGC Family ID: CGCFAM_02166
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3602_7 | HRGMv2_3602_7_43 | 46582 | 47634 | - | GT2 |
| pfam | HRGMv2_3602_7 | HRGMv2_3602_7_44 | 47624 | 47980 | - | DUF2304 |
| CAZyme | HRGMv2_3602_7 | HRGMv2_3602_7_45 | 47980 | 48711 | - | GT2 |
| pfam | HRGMv2_3602_7 | HRGMv2_3602_7_46 | 48902 | 49978 | - | NTP_transferase | NTP_transf_3 | ManC_GMP_beta-helix |
| pfam | HRGMv2_3602_7 | HRGMv2_3602_7_47 | 49997 | 50854 | - | UbiA |
| CAZyme | HRGMv2_3602_7 | HRGMv2_3602_7_48 | 50847 | 51971 | - | GT4 |
| NULL(UNKNOWN) | HRGMv2_3602_7 | HRGMv2_3602_7_49 | 51974 | 53665 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_3602_7 | HRGMv2_3602_7_50 | 53667 | 54254 | - | HAD |
| CAZyme | HRGMv2_3602_7 | HRGMv2_3602_7_51 | 54241 | 55014 | - | GT32 |
| CAZyme | HRGMv2_3602_7 | HRGMv2_3602_7_52 | 55011 | 56072 | - | GT2 |
| pfam | HRGMv2_3602_7 | HRGMv2_3602_7_53 | 56081 | 57133 | - | Glycos_transf_1 |
| NULL(UNKNOWN) | HRGMv2_3602_7 | HRGMv2_3602_7_54 | 57155 | 58900 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3602_7 | HRGMv2_3602_7_55 | 58909 | 61158 | - | GT2 | GT4 |
| pfam | HRGMv2_3602_7 | HRGMv2_3602_7_56 | 61166 | 62569 | - | Glyco_transf_4 | Glyco_trans_4_2 | Glyco_trans_1_4 |
| TC | HRGMv2_3602_7 | HRGMv2_3602_7_57 | 62577 | 63329 | - | 3.A.1.103.1 |
| TC | HRGMv2_3602_7 | HRGMv2_3602_7_58 | 63334 | 64116 | - | 3.A.1.103.4 |
Gene ID: HRGMv2_3602_7_43
Type: CAZyme
Location: 46582 - 47634 (-)
Type: CAZyme
Location: 46582 - 47634 (-)
Gene ID: HRGMv2_3602_7_44
Type: pfam
Location: 47624 - 47980 (-)
Type: pfam
Location: 47624 - 47980 (-)
Gene ID: HRGMv2_3602_7_45
Type: CAZyme
Location: 47980 - 48711 (-)
Type: CAZyme
Location: 47980 - 48711 (-)
Gene ID: HRGMv2_3602_7_46
Type: pfam
Location: 48902 - 49978 (-)
Type: pfam
Location: 48902 - 49978 (-)
Gene ID: HRGMv2_3602_7_47
Type: pfam
Location: 49997 - 50854 (-)
Type: pfam
Location: 49997 - 50854 (-)
Gene ID: HRGMv2_3602_7_48
Type: CAZyme
Location: 50847 - 51971 (-)
Type: CAZyme
Location: 50847 - 51971 (-)
Gene ID: HRGMv2_3602_7_49
Type:
Location: 51974 - 53665 (-)
Type:
Location: 51974 - 53665 (-)
Gene ID: HRGMv2_3602_7_50
Type: pfam
Location: 53667 - 54254 (-)
Type: pfam
Location: 53667 - 54254 (-)
Gene ID: HRGMv2_3602_7_51
Type: CAZyme
Location: 54241 - 55014 (-)
Type: CAZyme
Location: 54241 - 55014 (-)
Gene ID: HRGMv2_3602_7_52
Type: CAZyme
Location: 55011 - 56072 (-)
Type: CAZyme
Location: 55011 - 56072 (-)
Gene ID: HRGMv2_3602_7_53
Type: pfam
Location: 56081 - 57133 (-)
Type: pfam
Location: 56081 - 57133 (-)
Gene ID: HRGMv2_3602_7_54
Type:
Location: 57155 - 58900 (-)
Type:
Location: 57155 - 58900 (-)
Gene ID: HRGMv2_3602_7_55
Type: CAZyme
Location: 58909 - 61158 (-)
Type: CAZyme
Location: 58909 - 61158 (-)
Gene ID: HRGMv2_3602_7_56
Type: pfam
Location: 61166 - 62569 (-)
Type: pfam
Location: 61166 - 62569 (-)
Gene ID: HRGMv2_3602_7_57
Type: TC
Location: 62577 - 63329 (-)
Type: TC
Location: 62577 - 63329 (-)
Gene ID: HRGMv2_3602_7_58
Type: TC
Location: 63334 - 64116 (-)
Type: TC
Location: 63334 - 64116 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-465
Genus
CAG-465
Species
CAG-465 sp905204915
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.