PROTEIN: HRGMv2_3602_7_49
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Protein File & Metadata
Source:
HRGMv2_3602_7_49.pdb
Genome ID:
Protein ID:
HRGMv2_3602_7_49
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Protein Sequence
MKSFLEKIKI VDVNQITTFI LSFIFLNIAL TSVLFLIGVG ISNLHFLTSI IISAIVTYVI 60 NKKNTEEYSI KKVIVNWLIS ILIIFLSIMI ANIFYDNTWD GNTYHKEMIG LMKNGMNPVY 120 NENSGDVWVQ HYARAVETYA AVVYAFTGNI ESGKSINILL MLMLGVQVFK FLKKKNVNNI 180 ISTLIGIAVA VNPISLIQST SYYVDGVFTN VLFFLMLELL KITDSKEIKL KNLSFFWVSM 240 LTVICINIKF TSLLICTMFI GVFCIYWLYI SIAQKKLGAT FKKLFFFFVA VYIFAVVIVG 300 ESVYVKNFVK YGHPFYPLKG ENTGVDIVSG NEPEGLAEKS HVEKFIYTLF SKTYTWYDKK 360 PELKIPFTVY KDELYSMQFA DTRIGAFGPW YSGMLLLSLP IVLFYLIKKF IKKDKNAILL 420 LLILMAIVLP IPILPVVWQL RYYPQLYLLP IIAILLIVLD SDKMFKKIYS YLLITATLVN 480 TLLFVPAVFD NFKSSIRINK QLIYIYEQSL TKKVTISIED CPNAGARYNL VDKHITNYTF 540 LMEKMEDGEP MYFRFFYKIE EGE 563
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9HUZ2-F1-model_v4 | 86 | 562 | 20 | 475 | 0.6263 |
0.7239 |
| AF-Q9CD98-F1-model_v4 | 10 | 560 | 23 | 644 | 0.5871 |
0.6589 |
| AF-Q9HY61-F1-model_v4 | 6 | 563 | 3 | 547 | 0.5865 |
0.6173 |
| AF-O06152-F1-model_v4 | 6 | 563 | 49 | 556 | 0.5693 |
0.6409 |
| AF-F1M7C0-F1-model_v4 | 9 | 558 | 16 | 589 | 0.5295 |
0.6107 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-C1D745-F1-model_v4 | GT83 | 87 | 563 | 23 | 477 | 0.6282 |
0.7297 |
| AF-A0A5K8AGD7-F1-model_v4 | GT83 | 84 | 563 | 21 | 494 | 0.6281 |
0.7209 |
| AF-A0A5K7ZSZ1-F1-model_v4 | GT83 | 84 | 563 | 21 | 491 | 0.6271 |
0.7241 |
| AF-A0A3G7CNY7-F1-model_v4 | GT83 | 83 | 561 | 17 | 463 | 0.6252 |
0.7258 |
| A0A418T1M6 | GT83 | 87 | 563 | 22 | 478 | 0.6246 |
0.7229 |
| AF-Q5ZXU6-F1-model_v4 | GT83 | 87 | 563 | 28 | 491 | 0.624 |
0.7207 |
| AF-F6CX96-F1-model_v4 | GT83 | 86 | 563 | 23 | 473 | 0.6238 |
0.7248 |
| AF-A0A5C1DCK1-F1-model_v4 | GT83 | 87 | 563 | 24 | 488 | 0.6235 |
0.716 |
| AF-A0A3G7HBU3-F1-model_v4 | GT83 | 13 | 562 | 10 | 464 | 0.623 |
0.7125 |
| AF-A0A7D4IAN2-F1-model_v4 | GT83 | 13 | 563 | 9 | 476 | 0.6202 |
0.7016 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A7M2ZZ44 | GT83 | 85 | 562 | 19 | 475 | 0.6302 |
0.727 |
| C1D745 | GT83 | 87 | 563 | 23 | 477 | 0.6282 |
0.7297 |
| A0A559N9Q3 | GT83 | 86 | 563 | 21 | 473 | 0.625 |
0.7227 |
| A0A418T1M6 | GT83 | 87 | 563 | 22 | 478 | 0.6246 |
0.7229 |
| UDQ98670.1 | GT83 | 83 | 563 | 27 | 509 | 0.6235 |
0.7071 |
| P73712 | GT83 | 83 | 563 | 21 | 490 | 0.6214 |
0.7082 |
| A0A858RH77 | GT83 | 84 | 563 | 19 | 484 | 0.6198 |
0.7179 |
| UPH71178.1 | GT83 | 84 | 563 | 32 | 495 | 0.6193 |
0.7185 |
| A0A142BGT3 | GT83 | 84 | 563 | 35 | 500 | 0.6181 |
0.7152 |
| A0A126V232 | GT83 | 86 | 563 | 39 | 501 | 0.6178 |
0.72 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O67270-F1-model_v4 | 6 | 563 | 1 | 499 | 0.5955 |
0.6486 |
| AF-Q9HY61-F1-model_v4 | 6 | 563 | 3 | 547 | 0.5865 |
0.6173 |
| AF-A6V1N8-F1-model_v4 | 6 | 563 | 3 | 548 | 0.5861 |
0.6161 |
| AF-B7VBN0-F1-model_v4 | 6 | 563 | 3 | 547 | 0.5856 |
0.6167 |
| AF-A4SQX1-F1-model_v4 | 11 | 563 | 5 | 547 | 0.5723 |
0.605 |
| AF-Q7N3Q9-F1-model_v4 | 2 | 563 | 1 | 553 | 0.5687 |
0.5953 |
| AF-Q8ZDX9-F1-model_v4 | 3 | 563 | 2 | 554 | 0.5672 |
0.5938 |
| AF-B2VBI7-F1-model_v4 | 2 | 563 | 1 | 552 | 0.5659 |
0.5931 |
| AF-A4TIM6-F1-model_v4 | 9 | 563 | 6 | 553 | 0.5654 |
0.5969 |
| AF-A4WAM1-F1-model_v4 | 2 | 563 | 1 | 553 | 0.5629 |
0.5895 |