Cluster: HRGMv2_3573_CGC3
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_3573
- CGC Family ID: CGCFAM_02166
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3573_1 | HRGMv2_3573_1_417 | 439215 | 440363 | - | GT4 |
| pfam | HRGMv2_3573_1 | HRGMv2_3573_1_418 | 440377 | 441453 | - | NTP_transferase | NTP_transf_3 | ManC_GMP_beta-helix |
| pfam | HRGMv2_3573_1 | HRGMv2_3573_1_419 | 441485 | 441826 | - | DUF2304 |
| CAZyme | HRGMv2_3573_1 | HRGMv2_3573_1_420 | 441828 | 442535 | - | GT2 |
| NULL(UNKNOWN) | HRGMv2_3573_1 | HRGMv2_3573_1_421 | 442580 | 444787 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3573_1 | HRGMv2_3573_1_422 | 444808 | 446634 | - | GT32 |
| NULL(UNKNOWN) | HRGMv2_3573_1 | HRGMv2_3573_1_423 | 446651 | 447709 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_3573_1 | HRGMv2_3573_1_424 | 447718 | 449448 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3573_1 | HRGMv2_3573_1_425 | 449473 | 450222 | - | 3.A.1.103.1 |
| TC | HRGMv2_3573_1 | HRGMv2_3573_1_426 | 450227 | 451009 | - | 3.A.1.103.4 |
Gene ID: HRGMv2_3573_1_417
Type: CAZyme
Location: 439215 - 440363 (-)
Type: CAZyme
Location: 439215 - 440363 (-)
Gene ID: HRGMv2_3573_1_418
Type: pfam
Location: 440377 - 441453 (-)
Type: pfam
Location: 440377 - 441453 (-)
Gene ID: HRGMv2_3573_1_419
Type: pfam
Location: 441485 - 441826 (-)
Type: pfam
Location: 441485 - 441826 (-)
Gene ID: HRGMv2_3573_1_420
Type: CAZyme
Location: 441828 - 442535 (-)
Type: CAZyme
Location: 441828 - 442535 (-)
Gene ID: HRGMv2_3573_1_421
Type:
Location: 442580 - 444787 (-)
Type:
Location: 442580 - 444787 (-)
Gene ID: HRGMv2_3573_1_422
Type: CAZyme
Location: 444808 - 446634 (-)
Type: CAZyme
Location: 444808 - 446634 (-)
Gene ID: HRGMv2_3573_1_423
Type:
Location: 446651 - 447709 (-)
Type:
Location: 446651 - 447709 (-)
Gene ID: HRGMv2_3573_1_424
Type:
Location: 447718 - 449448 (-)
Type:
Location: 447718 - 449448 (-)
Gene ID: HRGMv2_3573_1_425
Type: TC
Location: 449473 - 450222 (-)
Type: TC
Location: 449473 - 450222 (-)
Gene ID: HRGMv2_3573_1_426
Type: TC
Location: 450227 - 451009 (-)
Type: TC
Location: 450227 - 451009 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-465
Genus
CAG-465
Species
CAG-465 sp000433335
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.