PROTEIN: HRGMv2_3573_1_424
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Protein File & Metadata
Source:
HRGMv2_3573_1_424.pdb
Genome ID:
Protein ID:
HRGMv2_3573_1_424
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Detailed structural information will appear here after analysis...
Protein Sequence
MDNIKISYFG SSSKFLKGYE KAFSNCKLVC LDKKNLIEDK NEILENEKNI FSYLYENGGL 60 FINGDFYFLD GIQNFFDNDF FISYSDYENL SSNLIWAKEK NNQTIKKILD LIGTGKYNNI 120 TEIMSEIVGS NLKQNYNYIY KFGGNSFIYP YDYFFPVDYE RIGKGFSDNI KAIFVNKSKL 180 RLKDRNKIRT LRKIGPTACE YLFATLRNAK NKVGYKKYIF FQRLKNKFSI KEDSGINETL 240 NTLDKYLKDK KNGKDIEYLI IHNPRWLGVT SATKELFINL LPIQEVYLNK NIDSIVNKIL 300 ELDVKQIIFS AFDYGWDKIA CKIREKSPNI KLKSFWHGSH SQVIEEINWE TNLMVINLHK 360 KGVIDVMGTC KESLVNFYKS QGYKTAFLKN TVRLQDDIKE KLKNVEKIND GKIRFGIYSA 420 GTDWRKNTYN QVMAASLFEN SELQVIPLRY DIKKMAYYNG LDVIGSDTHL KREDLLIEMA 480 KRDAVLYVTF SECAPMLPIE SLETGTICIM GNNHHYFKGS KLHDYLVVER EDDLDEIVRK 540 IKNALENKEE ILRLYKAWKV ENDNESAKSV KEFLKM 576
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0H3GSJ8-F1-model_v4 | 253 | 576 | 1 | 350 | 0.6036 |
0.8196 |
| AF-O05083-F1-model_v4 | 255 | 574 | 1 | 353 | 0.5966 |
0.8181 |
| AF-Q2G255-F1-model_v4 | 256 | 576 | 1 | 370 | 0.5962 |
0.8482 |
| AF-X8F0S0-F1-model_v4 | 253 | 576 | 1 | 346 | 0.593 |
0.8015 |
| AF-Q8DRG8-F1-model_v4 | 236 | 576 | 7 | 397 | 0.5925 |
0.8228 |
| AF-Q9HUG1-F1-model_v4 | 247 | 576 | 1 | 371 | 0.592 |
0.819 |
| AF-Q9HW90-F1-model_v4 | 256 | 576 | 1 | 359 | 0.5905 |
0.8293 |
| AF-K0EZX0-F1-model_v4 | 254 | 576 | 6 | 364 | 0.5887 |
0.816 |
| AF-Q58577-F1-model_v4 | 253 | 576 | 1 | 349 | 0.5878 |
0.7946 |
| AF-Q0P9C7-F1-model_v4 | 255 | 576 | 1 | 365 | 0.5875 |
0.8151 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UNH41714.1 | GT4 | 250 | 575 | 1 | 321 | 0.6276 |
0.8149 |
| USL27089.1 | GT4 | 256 | 576 | 1 | 324 | 0.6216 |
0.8134 |
| AF-A6L3Q0-F1-model_v4 | GT4 | 254 | 576 | 1 | 329 | 0.6192 |
0.81 |
| AF-A0A0E3S983-F1-model_v4 | GT4 | 255 | 576 | 1 | 363 | 0.619 |
0.8583 |
| A0A0J0UK98 | GT4 | 253 | 576 | 1 | 329 | 0.6184 |
0.8092 |
| AF-B8GDE8-F1-model_v4 | GT4 | 255 | 576 | 3 | 357 | 0.6158 |
0.854 |
| QKU64098.1 | GT4 | 245 | 576 | 1 | 329 | 0.6144 |
0.7954 |
| AF-A0A060R639-F1-model_v4 | GT4 | 256 | 576 | 1 | 345 | 0.6141 |
0.8313 |
| AF-A1AUG7-F1-model_v4 | GT4 | 257 | 576 | 1 | 320 | 0.6132 |
0.7982 |
| AF-F4BZD5-F1-model_v4 | GT4 | 256 | 576 | 1 | 319 | 0.6129 |
0.8016 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UNH41714.1 | GT4 | 250 | 575 | 1 | 321 | 0.6276 |
0.8149 |
| USL27089.1 | GT4 | 256 | 576 | 1 | 324 | 0.6216 |
0.8134 |
| UYU49049.1 | GT4 | 255 | 576 | 1 | 326 | 0.6196 |
0.8086 |
| A0A0E3S983 | GT4 | 255 | 576 | 1 | 363 | 0.619 |
0.8583 |
| A0A0J0UK98 | GT4 | 253 | 576 | 1 | 329 | 0.6184 |
0.8092 |
| QUB43552.1 | GT4 | 255 | 576 | 1 | 326 | 0.6151 |
0.8055 |
| A0A5K7X1B7 | GT4 | 255 | 574 | 1 | 364 | 0.6148 |
0.8574 |
| QKU64098.1 | GT4 | 245 | 576 | 1 | 329 | 0.6144 |
0.7954 |
| UVR97660.1 | GT4 | 255 | 576 | 1 | 332 | 0.6143 |
0.8124 |
| A0A060R639 | GT4 | 256 | 576 | 1 | 345 | 0.6141 |
0.8313 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 2jjm-assembly1.cif.gz_B | 255 | 576 | 1 | 358 | 0.6042 |
0.8312 |
| 5d01-assembly1.cif.gz_B | 254 | 576 | 1 | 359 | 0.6029 |
0.8284 |
| 5d00-assembly1.cif.gz_B | 254 | 576 | 1 | 360 | 0.6018 |
0.8281 |
| 5d00-assembly1.cif.gz_A | 254 | 576 | 1 | 358 | 0.6013 |
0.8274 |
| 3mbo-assembly1.cif.gz_B | 255 | 576 | 1 | 365 | 0.6009 |
0.8392 |
| 5d01-assembly1.cif.gz_A | 254 | 576 | 1 | 355 | 0.6005 |
0.8214 |
| 3mbo-assembly4.cif.gz_G | 255 | 576 | 1 | 361 | 0.6001 |
0.8331 |
| 3mbo-assembly4.cif.gz_H | 255 | 576 | 1 | 365 | 0.5981 |
0.8349 |
| 6n1x-assembly1.cif.gz_A | 254 | 576 | 3 | 374 | 0.5979 |
0.8419 |
| 4xsp-assembly1.cif.gz_A | 255 | 576 | 1 | 365 | 0.5977 |
0.8296 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9R9N0-F1-model_v4 | 256 | 576 | 1 | 339 | 0.6041 |
0.813 |
| AF-P42982-F1-model_v4 | 254 | 576 | 2 | 373 | 0.5967 |
0.8404 |
| AF-P54490-F1-model_v4 | 256 | 576 | 1 | 352 | 0.5954 |
0.8214 |
| AF-Q46634-F1-model_v4 | 255 | 575 | 1 | 351 | 0.5952 |
0.8112 |
| AF-O68547-F1-model_v4 | 245 | 576 | 1 | 346 | 0.5919 |
0.7837 |
| AF-Q81ST7-F1-model_v4 | 254 | 576 | 1 | 372 | 0.5917 |
0.8378 |
| AF-Q58577-F1-model_v4 | 253 | 576 | 1 | 349 | 0.5878 |
0.7946 |
| AF-Q0P9C7-F1-model_v4 | 255 | 576 | 1 | 365 | 0.5875 |
0.8151 |
| AF-Q48453-F1-model_v4 | 256 | 576 | 1 | 358 | 0.5873 |
0.8088 |
| AF-Q59002-F1-model_v4 | 256 | 576 | 1 | 383 | 0.587 |
0.8465 |