Cluster: HRGMv2_3561_CGC8
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3561
- CGC Family ID: CGCFAM_00060
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3561_3 | HRGMv2_3561_3_39 | 40467 | 42761 | + | GT4 |
| NULL(UNKNOWN) | HRGMv2_3561_3 | HRGMv2_3561_3_40 | 42739 | 43794 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3561_3 | HRGMv2_3561_3_41 | 43807 | 44613 | + | 3.A.1.104.1 |
| TC | HRGMv2_3561_3 | HRGMv2_3561_3_42 | 44626 | 45357 | + | 3.A.1.103.1 |
| pfam | HRGMv2_3561_3 | HRGMv2_3561_3_43 | 45370 | 46614 | + | UDPGP |
| pfam | HRGMv2_3561_3 | HRGMv2_3561_3_44 | 46639 | 47637 | + | adh_short | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | KR | GDP_Man_Dehyd |
| TC | HRGMv2_3561_3 | HRGMv2_3561_3_45 | 47671 | 48309 | + | 4.F.1.1.7 |
Gene ID: HRGMv2_3561_3_39
Type: CAZyme
Location: 40467 - 42761 (+)
Type: CAZyme
Location: 40467 - 42761 (+)
Gene ID: HRGMv2_3561_3_40
Type:
Location: 42739 - 43794 (+)
Type:
Location: 42739 - 43794 (+)
Gene ID: HRGMv2_3561_3_41
Type: TC
Location: 43807 - 44613 (+)
Type: TC
Location: 43807 - 44613 (+)
Gene ID: HRGMv2_3561_3_42
Type: TC
Location: 44626 - 45357 (+)
Type: TC
Location: 44626 - 45357 (+)
Gene ID: HRGMv2_3561_3_43
Type: pfam
Location: 45370 - 46614 (+)
Type: pfam
Location: 45370 - 46614 (+)
Gene ID: HRGMv2_3561_3_44
Type: pfam
Location: 46639 - 47637 (+)
Type: pfam
Location: 46639 - 47637 (+)
Gene ID: HRGMv2_3561_3_45
Type: TC
Location: 47671 - 48309 (+)
Type: TC
Location: 47671 - 48309 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
HGM13634
Species
HGM13634 sp900770385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.