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PROTEIN: HRGMv2_3561_3_40

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Protein File & Metadata
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Source:
HRGMv2_3561_3_40.pdb
Genome ID:
HRGMv2_3561
Protein ID:
HRGMv2_3561_3_40

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Detailed structural information will appear here after analysis...

Protein Sequence 
MKERLKNNKK   NIIIFLMIVL   FLLCFIPNKT   NNAKNQLRIE   GPYGDIQSYH   PKVLAFENKW 60
NGYKYWMSYT   PYPQGNDSKE   NPCIAVSNDL   INWQAPSKNT   NPLDEPENKQ   SGKRYNSDSH 120
IVYNNDKNEL   ECYWRYVDDI   ENKVYIYRKT   SKDGITWGSK   IITAYSDNRK   EKDYISPAII 180
YENKLYKMWY   VDKDYTTIYA   TSKDGITWND   QNFMKLEYPT   KLNTWHLDVI   HTKKGYEMLV 240
VAWDKWANRN   DMSLYYSYSE   DEIGWKKAEK   ILDPNIKSNT   AWDNKGIYRS   SFIYEDGIYY 300
VFYGGTDRKY   NHGIGLVIGK   DIYNLRDNDI   DYKKTDSLEK   FRNMVKNEKT   R 351
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P9WLW7-F1-model_v4 30 321 2 299 0.7001 0.7918
AF-B4FDS0-F1-model_v4 31 339 30 364 0.6908 0.8081
AF-A0A0H3GMN3-F1-model_v4 32 332 3 316 0.6776 0.765
AF-C0P159-F1-model_v4 8 326 8 326 0.6734 0.7329
AF-Q6ZA95-F1-model_v4 31 333 40 381 0.6712 0.8166
AF-A0A1C1CEU0-F1-model_v4 34 329 1 323 0.6711 0.7749
AF-A0A0D2GZK6-F1-model_v4 33 329 1 326 0.6693 0.774
AF-A0A175VRM5-F1-model_v4 58 333 2 274 0.668 0.7845
AF-U7PNS0-F1-model_v4 20 325 12 325 0.6674 0.7522
AF-A0A175VX88-F1-model_v4 34 346 23 322 0.6661 0.7629
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A7H0H1C4-F1-model_v4 GH43_24 36 350 1 295 0.7112 0.7921
AF-E0RYY0-F1-model_v4 GH43_29 33 346 12 313 0.7104 0.7932
AF-A0A2S1QWH3-F1-model_v4 GH130 30 322 6 293 0.7094 0.8061
AF-A0A494VQ83-F1-model_v4 GH43_2 33 331 22 313 0.7048 0.8157
AF-A0A858RGX2-F1-model_v4 GH43_34 33 346 18 313 0.7031 0.8035
AF-I3RED3-F1-model_v4 GH130 30 325 1 292 0.7028 0.79
AF-A0A4P6Y6A5-F1-model_v4 GH43_2 33 333 25 313 0.7002 0.816
AF-Q2U8C6-F1-model_v4 GH43_6 1 326 1 319 0.6992 0.7538
AF-A0A380YN22-F1-model_v4 GH43_2 33 329 29 322 0.6964 0.8082
AF-A0A5P8M866-F1-model_v4 GH43_24 32 349 3 306 0.6958 0.7688
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
UYQ93188.1 GH43_29 33 328 1 284 0.7123 0.8039
A0A172TCZ0 GH130 29 325 1 290 0.7111 0.8016
A0A2S1QWH3 GH130 30 322 6 293 0.7094 0.8061
A0A518BU50 GH130 21 325 1 307 0.7091 0.7849
QQR35515.1 GH159 33 349 1 316 0.7071 0.7624
A0A1C7HKV8 GH43_24 32 350 2 305 0.7059 0.7827
A0A4P6Y827 GH43 34 345 19 304 0.7042 0.8227
D7CYB7 GH130 26 325 1 302 0.7026 0.7871
E3UBL8 GH43_30 33 328 3 306 0.7018 0.7917
A0A7Z2VPF9 GH32 33 343 1 304 0.7017 0.7692
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
6n1b-assembly1.cif.gz_A 28 325 1 374 0.7431 0.9211
3qz4-assembly2.cif.gz_B 34 329 1 306 0.722 0.8131
3qef-assembly1.cif.gz_A 34 346 1 295 0.7158 0.7959
3qee-assembly2.cif.gz_B 33 346 2 297 0.7139 0.7952
4nov-assembly1.cif.gz_A 33 346 5 306 0.7137 0.789
4qqs-assembly1.cif.gz_A 33 346 2 311 0.7018 0.7659
5flw-assembly2.cif.gz_B 32 332 2 298 0.7007 0.7852
7zei-assembly4.cif.gz_D 33 345 3 305 0.6964 0.7725
5m8e-assembly1.cif.gz_B 32 333 3 323 0.6803 0.7732
5m8b-assembly1.cif.gz_B 31 334 4 325 0.6776 0.767
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P9WLW6-F1-model_v4 30 321 2 299 0.703 0.7945
AF-B8NDL1-F1-model_v4 1 326 1 319 0.7027 0.7569
AF-P9WLW7-F1-model_v4 30 321 2 299 0.7001 0.7918
AF-Q2U8C6-F1-model_v4 1 326 1 319 0.6986 0.7533
AF-Q5BA96-F1-model_v4 1 325 1 322 0.6979 0.7488
AF-A1CLG4-F1-model_v4 1 326 1 321 0.6948 0.7465
AF-Q9HFS9-F1-model_v4 1 325 1 321 0.6943 0.746
AF-B0XZW5-F1-model_v4 1 326 1 321 0.6923 0.7444
AF-Q0CRJ6-F1-model_v4 2 326 1 320 0.6912 0.745
AF-B8NMD3-F1-model_v4 1 326 1 317 0.6906 0.7472
Download Full SwissProt Results