Cluster: HRGMv2_3561_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3561
- CGC Family ID: CGCFAM_02312
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3561_9 | HRGMv2_3561_9_1 | 242 | 2869 | + | 3.A.3.4.1 |
| STP | HRGMv2_3561_9 | HRGMv2_3561_9_2 | 3006 | 4010 | + | AAA |
| CAZyme | HRGMv2_3561_9 | HRGMv2_3561_9_3 | 4023 | 4958 | + | GT2 |
| NULL(UNKNOWN) | HRGMv2_3561_9 | HRGMv2_3561_9_4 | 4970 | 6466 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3561_9 | HRGMv2_3561_9_5 | 6476 | 6826 | + | GT2 |
Gene ID: HRGMv2_3561_9_1
Type: TC
Location: 242 - 2869 (+)
Type: TC
Location: 242 - 2869 (+)
Gene ID: HRGMv2_3561_9_2
Type: STP
Location: 3006 - 4010 (+)
Type: STP
Location: 3006 - 4010 (+)
Gene ID: HRGMv2_3561_9_3
Type: CAZyme
Location: 4023 - 4958 (+)
Type: CAZyme
Location: 4023 - 4958 (+)
Gene ID: HRGMv2_3561_9_4
Type:
Location: 4970 - 6466 (+)
Type:
Location: 4970 - 6466 (+)
Gene ID: HRGMv2_3561_9_5
Type: CAZyme
Location: 6476 - 6826 (+)
Type: CAZyme
Location: 6476 - 6826 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
HGM13634
Species
HGM13634 sp900770385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.