PROTEIN: HRGMv2_3561_9_4
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
HRGMv2_3561_9_4.pdb
Genome ID:
Protein ID:
HRGMv2_3561_9_4
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MKKTKLRNGL LYILMLITIL SIIILKPINN LDEIWNYNFA RNIANGLVPY KDFNMLQMPL 60 LPIICGVILK IFLNELIVMR IIAAFMCAGI LYFSYKILNK LNVKKEVSVI CVFFLGWLLK 120 DYFCIDYNFA TLFVTLIIIN IEISSYKKND NFFYLNLKTS LLIGVLAGLT LGFKQTSGLL 180 ICIATLGNKL LFVRNKNNFK IFLKDFLFKL IGILIPVILI LLYLFATNSI QDFINYTIKG 240 ITSFSNSLSY KYLIKLNTIG ILSVLVPISI IYYWIKTIIM EKNKEQYILL VYGLGIFVIA 300 FPISDNIHFL IGTEPFIILI QSEIYNLLYT LYKRFLSNTK IKFLVYFLMC FASSIVILGS 360 IIFSVFNLIH YYNQKELLSE LSHYKYIPID TRLEEQINRI DKYILNEKKD IKILDATSAI 420 YMIPINKYNK NYDMLLKGNL GENGEKNIKE EIKNSRYIKY LVLQDRFNKN WQTPLDVIEY 480 VKTNKNKIGE IEIFDIYE 498
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8CZ87-F1-model_v4 | 1 | 498 | 32 | 517 | 0.6918 |
0.7408 |
| AF-K0EN63-F1-model_v4 | 8 | 498 | 1 | 496 | 0.6771 |
0.7317 |
| AF-Q32DT1-F1-model_v4 | 2 | 498 | 1 | 547 | 0.65 |
0.7022 |
| AF-P76473-F1-model_v4 | 2 | 498 | 1 | 547 | 0.6492 |
0.7018 |
| AF-Q9HY61-F1-model_v4 | 3 | 498 | 2 | 544 | 0.6489 |
0.7028 |
| AF-A0A0H3GZQ8-F1-model_v4 | 2 | 498 | 1 | 548 | 0.648 |
0.7007 |
| AF-K0EVQ0-F1-model_v4 | 1 | 498 | 2 | 548 | 0.6443 |
0.6938 |
| AF-O52327-F1-model_v4 | 2 | 498 | 1 | 544 | 0.6437 |
0.6948 |
| AF-K0EVV4-F1-model_v4 | 1 | 498 | 26 | 656 | 0.642 |
0.7449 |
| AF-K0F428-F1-model_v4 | 1 | 498 | 26 | 660 | 0.6394 |
0.7433 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-M4V8Z6-F1-model_v4 | GT83 | 1 | 498 | 1 | 477 | 0.6953 |
0.7321 |
| AF-A0A518AYL4-F1-model_v4 | GT83 | 1 | 498 | 2 | 484 | 0.6922 |
0.7304 |
| AF-A0A2Z4Y6P6-F1-model_v4 | GT83 | 1 | 498 | 4 | 495 | 0.6885 |
0.7172 |
| AF-A0A518N6I7-F1-model_v4 | GT83 | 1 | 498 | 4 | 493 | 0.6846 |
0.7189 |
| AF-F2LXI8-F1-model_v4 | GT83 | 1 | 498 | 7 | 427 | 0.684 |
0.7643 |
| ATH06731.1 | GT83 | 1 | 498 | 6 | 471 | 0.6793 |
0.7319 |
| AF-A0A6P1T0R6-F1-model_v4 | GT0 | 1 | 498 | 12 | 530 | 0.6788 |
0.7237 |
| AF-A0A345ZN33-F1-model_v4 | GT83 | 1 | 498 | 7 | 495 | 0.6759 |
0.717 |
| AF-G7URS4-F1-model_v4 | GT83 | 1 | 498 | 10 | 496 | 0.6753 |
0.7162 |
| AF-Q3A535-F1-model_v4 | GT83 | 3 | 498 | 27 | 494 | 0.6747 |
0.7439 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| K4R0C6 | GT83 | 1 | 498 | 18 | 474 | 0.7057 |
0.7686 |
| A0A3M4VJW3 | GT83 | 1 | 498 | 1 | 486 | 0.7018 |
0.7393 |
| M4V8Z6 | GT83 | 1 | 498 | 1 | 477 | 0.6953 |
0.7321 |
| A0A518AYL4 | GT83 | 1 | 498 | 2 | 484 | 0.6922 |
0.7304 |
| A0A2Z4Y6P6 | GT83 | 1 | 498 | 4 | 495 | 0.6885 |
0.7172 |
| F2LXI8 | GT83 | 1 | 498 | 7 | 427 | 0.684 |
0.7643 |
| A0A2P1PXF2 | GT83 | 3 | 498 | 16 | 484 | 0.6821 |
0.7395 |
| A0A6C2YNQ2 | GT83 | 1 | 498 | 22 | 501 | 0.6816 |
0.7318 |
| UNK49813.1 | GT83 | 1 | 498 | 14 | 507 | 0.681 |
0.7154 |
| ATH06731.1 | GT83 | 1 | 498 | 6 | 471 | 0.6793 |
0.7319 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5ezm-assembly1.cif.gz_A | 2 | 498 | 1 | 529 | 0.6615 |
0.708 |
| 5f15-assembly1.cif.gz_A | 3 | 498 | 1 | 533 | 0.6571 |
0.7071 |
| 8if8-assembly1.cif.gz_C | 1 | 498 | 72 | 595 | 0.6288 |
0.703 |
| 8age-assembly1.cif.gz_A | 1 | 498 | 6 | 608 | 0.6124 |
0.7044 |
| 8b6l-assembly1.cif.gz_I | 1 | 498 | 3 | 674 | 0.6008 |
0.7066 |
| 6gxc-assembly1.cif.gz_A | 1 | 498 | 12 | 705 | 0.6007 |
0.7145 |
| 5ogl-assembly1.cif.gz_A | 1 | 498 | 11 | 706 | 0.599 |
0.7131 |
| 3wak-assembly1.cif.gz_A | 1 | 498 | 5 | 772 | 0.5701 |
0.7286 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q7N3Q9-F1-model_v4 | 1 | 498 | 3 | 549 | 0.6667 |
0.72 |
| AF-Q1MLH5-F1-model_v4 | 4 | 498 | 2 | 467 | 0.664 |
0.712 |
| AF-A9R091-F1-model_v4 | 1 | 498 | 1 | 550 | 0.6634 |
0.7171 |
| AF-Q8ZDX9-F1-model_v4 | 2 | 498 | 2 | 550 | 0.6613 |
0.7159 |
| AF-B2K5L1-F1-model_v4 | 3 | 498 | 3 | 550 | 0.6602 |
0.716 |
| AF-B4EUL1-F1-model_v4 | 6 | 498 | 8 | 547 | 0.6594 |
0.7151 |
| AF-Q1CIH9-F1-model_v4 | 3 | 498 | 3 | 550 | 0.6591 |
0.7153 |
| AF-A0KGY4-F1-model_v4 | 3 | 498 | 1 | 543 | 0.659 |
0.7108 |
| AF-A1JPM4-F1-model_v4 | 3 | 498 | 3 | 550 | 0.659 |
0.7147 |
| AF-A4TIM6-F1-model_v4 | 3 | 498 | 3 | 550 | 0.6588 |
0.714 |