Cluster: HRGMv2_3558_CGC4
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3558
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3558_2 | HRGMv2_3558_2_7 | 7030 | 7716 | + | 9.B.18.1.2 |
| CAZyme | HRGMv2_3558_2 | HRGMv2_3558_2_8 | 7773 | 8477 | + | GT111 |
| pfam | HRGMv2_3558_2 | HRGMv2_3558_2_9 | 8562 | 9992 | + | Glycos_transf_1 | Glyco_trans_1_4 |
| pfam | HRGMv2_3558_2 | HRGMv2_3558_2_10 | 9998 | 10993 | + | Stealth_CR2 | Stealth_CR1 |
| CAZyme | HRGMv2_3558_2 | HRGMv2_3558_2_11 | 11013 | 12032 | + | GT113 |
| NULL(UNKNOWN) | HRGMv2_3558_2 | HRGMv2_3558_2_12 | 12034 | 13239 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3558_2 | HRGMv2_3558_2_13 | 13360 | 14811 | + | 2.A.66.2.16 |
Gene ID: HRGMv2_3558_2_7
Type: TC
Location: 7030 - 7716 (+)
Type: TC
Location: 7030 - 7716 (+)
Gene ID: HRGMv2_3558_2_8
Type: CAZyme
Location: 7773 - 8477 (+)
Type: CAZyme
Location: 7773 - 8477 (+)
Gene ID: HRGMv2_3558_2_9
Type: pfam
Location: 8562 - 9992 (+)
Type: pfam
Location: 8562 - 9992 (+)
Gene ID: HRGMv2_3558_2_10
Type: pfam
Location: 9998 - 10993 (+)
Type: pfam
Location: 9998 - 10993 (+)
Gene ID: HRGMv2_3558_2_11
Type: CAZyme
Location: 11013 - 12032 (+)
Type: CAZyme
Location: 11013 - 12032 (+)
Gene ID: HRGMv2_3558_2_12
Type:
Location: 12034 - 13239 (+)
Type:
Location: 12034 - 13239 (+)
Gene ID: HRGMv2_3558_2_13
Type: TC
Location: 13360 - 14811 (+)
Type: TC
Location: 13360 - 14811 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-492
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.