PROTEIN: HRGMv2_3558_2_12
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Protein File & Metadata
Source:
HRGMv2_3558_2_12.pdb
Genome ID:
Protein ID:
HRGMv2_3558_2_12
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Protein Sequence
MKIFSTFFEK VKENYISLFC IYFVTIFLDT TTLRIDFPIL ETVCKIIRYI IYSLFIIRTI 60 MVLPDIKKNI IKLKISKENI VILTFILLFI ISIIGNFVIT GEKRLIFLSL VLIASYNVDY 120 DKIIKNMMKL QIILTTFIVA LSIMGITQNY IVYRGIECRY SLGFGYTTSL AQLVLFSILL 180 AIYKKEFKLN IIEIFYIQLI NLFTYFITDS RAEFIFLEFI IIISFIYNIG VLNKIKRIKK 240 YVSKTFVYTF WTYPVLSFFI IYVYPVGGIF EKINRILSNR LLQSHNILKQ YGVKLFGNNI 300 EFIGNGIADK LKYGSNVASN YVDNEYLQLL FLYGMLFICI FVILVTIMLI NLERKGKYKE 360 IFVCFIYLTF GLLNPRIINL IYSPIPFILM HEIIKCLKKE E 401
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A5P3FVF2-F1-model_v4 | 5 | 392 | 5 | 383 | 0.653 |
0.7309 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A7D6J0J0-F1-model_v4 | GT4 | 1 | 401 | 9 | 423 | 0.6881 |
0.7313 |
| AF-A2S058-F1-model_v4 | GH39 | 5 | 401 | 1 | 403 | 0.6711 |
0.7204 |
| AF-A0A7L9SQD7-F1-model_v4 | GT4 | 9 | 401 | 23 | 480 | 0.6123 |
0.8204 |
| B7AUF6 | GT4 | 6 | 400 | 13 | 381 | 0.5844 |
0.8496 |
| AF-A0A7Z3BHU7-F1-model_v4 | GH39 | 1 | 400 | 12 | 418 | 0.5223 |
0.7216 |
| AF-A0A6G6J4Y8-F1-model_v4 | GH39 | 1 | 400 | 11 | 418 | 0.5221 |
0.7214 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A7D6J0J0 | GT4 | 1 | 401 | 9 | 423 | 0.6881 |
0.7313 |
| A2S058 | GH39 | 5 | 401 | 1 | 403 | 0.6711 |
0.7204 |
| A0A7L9SQD7 | GT4 | 9 | 401 | 23 | 480 | 0.6123 |
0.8204 |
| B7AUF6 | GT4 | 6 | 400 | 13 | 381 | 0.5844 |
0.8496 |
| M4X4V7 | GH39 | 1 | 401 | 12 | 419 | 0.5217 |
0.72 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.