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Cluster: HRGMv2_3558_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3558_18 HRGMv2_3558_18_1 721 2016 + 3.A.25.1.1
STP HRGMv2_3558_18 HRGMv2_3558_18_2 2235 3143 + NUDIX
STP HRGMv2_3558_18 HRGMv2_3558_18_3 3184 3678 + NUDIX
TC HRGMv2_3558_18 HRGMv2_3558_18_4 3844 4494 + 1.A.14.2.2
NULL(UNKNOWN) HRGMv2_3558_18 HRGMv2_3558_18_5 4562 5227 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3558_18 HRGMv2_3558_18_6 5796 6497 + 3.A.1.122.14
pfam HRGMv2_3558_18 HRGMv2_3558_18_7 6512 8941 + FtsX | FtsX
NULL(UNKNOWN) HRGMv2_3558_18 HRGMv2_3558_18_8 9042 9800 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3558_18 HRGMv2_3558_18_9 10050 11087 + CBM50 | GH25
Gene ID: HRGMv2_3558_18_1
Type: TC
Location: 721 - 2016 (+)
Gene ID: HRGMv2_3558_18_2
Type: STP
Location: 2235 - 3143 (+)
Gene ID: HRGMv2_3558_18_3
Type: STP
Location: 3184 - 3678 (+)
Gene ID: HRGMv2_3558_18_4
Type: TC
Location: 3844 - 4494 (+)
Gene ID: HRGMv2_3558_18_5
Type:
Location: 4562 - 5227 (-)
Gene ID: HRGMv2_3558_18_6
Type: TC
Location: 5796 - 6497 (+)
Gene ID: HRGMv2_3558_18_7
Type: pfam
Location: 6512 - 8941 (+)
Gene ID: HRGMv2_3558_18_8
Type:
Location: 9042 - 9800 (-)
Gene ID: HRGMv2_3558_18_9
Type: CAZyme
Location: 10050 - 11087 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
TANB77
→
Family
CAG-508
→
Genus
CAG-492
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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