PROTEIN: HRGMv2_3558_18_5
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
HRGMv2_3558_18_5.pdb
Genome ID:
Protein ID:
HRGMv2_3558_18_5
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MNQCKISNLY NLDETIAKKI FNGCEYPWEV LPRIKDFIIE LGQTLNSEEY NKIGENVWIA 60 KSAKIAPTAY INGPAIIGKD AEIRHCAFIR GNAIVGEGCV VGNSTELKNV ILFNRVQVPH 120 YNYVGDSILG YRSHMGAGSI TSNVKSDKKL VVVKNGTEKI ETGLKKFGAM LGDNVEVGCG 180 SVLNPGTVIG KNSNIYPLSS VRGVLAENSI YKKQGEIVNK I 221
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P75697-F1-model_v4 | 13 | 214 | 1 | 222 | 0.7898 |
0.8958 |
| AF-Q58501-F1-model_v4 | 1 | 214 | 12 | 399 | 0.6493 |
0.8776 |
| AF-G3XD01-F1-model_v4 | 53 | 215 | 5 | 153 | 0.5927 |
0.8209 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5z09-assembly1.cif.gz_F-3 | 1 | 213 | 11 | 364 | 0.6819 |
0.8893 |
| 5z09-assembly2.cif.gz_E-2 | 1 | 213 | 11 | 369 | 0.6787 |
0.8895 |
| 2ggo-assembly1.cif.gz_A | 1 | 213 | 10 | 401 | 0.6601 |
0.8907 |
| 5z0a-assembly1.cif.gz_E-2 | 1 | 212 | 11 | 396 | 0.6593 |
0.8897 |
| 5z0a-assembly2.cif.gz_C-3 | 1 | 212 | 11 | 396 | 0.6589 |
0.8893 |
| 5z09-assembly2.cif.gz_D-5 | 1 | 213 | 11 | 401 | 0.6589 |
0.8893 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q0TGD0-F1-model_v4 | 13 | 214 | 1 | 222 | 0.7903 |
0.8957 |
| AF-P75697-F1-model_v4 | 13 | 214 | 1 | 222 | 0.7898 |
0.8958 |
| AF-Q975F9-F1-model_v4 | 1 | 213 | 11 | 401 | 0.6598 |
0.8904 |
| AF-Q58501-F1-model_v4 | 1 | 214 | 12 | 399 | 0.6493 |
0.8776 |
| AF-A4FX98-F1-model_v4 | 1 | 214 | 11 | 401 | 0.6482 |
0.8783 |
| AF-A6VG23-F1-model_v4 | 1 | 214 | 11 | 401 | 0.6476 |
0.8775 |
| AF-Q6LYB5-F1-model_v4 | 1 | 214 | 11 | 401 | 0.6469 |
0.8767 |
| AF-A6UP85-F1-model_v4 | 1 | 214 | 11 | 405 | 0.6455 |
0.8769 |
| AF-A6UUQ4-F1-model_v4 | 1 | 214 | 11 | 401 | 0.6451 |
0.8742 |
| AF-G3XD01-F1-model_v4 | 53 | 215 | 5 | 153 | 0.5927 |
0.8209 |