Cluster: HRGMv2_3546_CGC4
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 6
- Substrate:
- Genome ID: HRGMv2_3546
- CGC Family ID: CGCFAM_02199
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3546_1 | HRGMv2_3546_1_67 | 67720 | 68727 | + | GT2 |
| pfam | HRGMv2_3546_1 | HRGMv2_3546_1_68 | 68827 | 69618 | + | ABC2_membrane |
| CAZyme | HRGMv2_3546_1 | HRGMv2_3546_1_69 | 69639 | 70631 | + | GT2 |
| TC | HRGMv2_3546_1 | HRGMv2_3546_1_70 | 70676 | 71995 | + | 3.A.1.103.6 |
| pfam | HRGMv2_3546_1 | HRGMv2_3546_1_71 | 72026 | 72940 | + | Lactamase_B |
| NULL(UNKNOWN) | HRGMv2_3546_1 | HRGMv2_3546_1_72 | 72960 | 74465 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3546_1 | HRGMv2_3546_1_73 | 74486 | 76195 | + | GT2 |
| CAZyme | HRGMv2_3546_1 | HRGMv2_3546_1_74 | 76212 | 78443 | + | GT2 |
| pfam | HRGMv2_3546_1 | HRGMv2_3546_1_75 | 78455 | 79993 | + | DUF2142 |
| CAZyme | HRGMv2_3546_1 | HRGMv2_3546_1_76 | 79957 | 80697 | + | GT2 |
| pfam | HRGMv2_3546_1 | HRGMv2_3546_1_77 | 80722 | 81063 | + | DUF2304 |
| CAZyme | HRGMv2_3546_1 | HRGMv2_3546_1_78 | 81075 | 82112 | + | GT2 |
Gene ID: HRGMv2_3546_1_67
Type: CAZyme
Location: 67720 - 68727 (+)
Type: CAZyme
Location: 67720 - 68727 (+)
Gene ID: HRGMv2_3546_1_68
Type: pfam
Location: 68827 - 69618 (+)
Type: pfam
Location: 68827 - 69618 (+)
Gene ID: HRGMv2_3546_1_69
Type: CAZyme
Location: 69639 - 70631 (+)
Type: CAZyme
Location: 69639 - 70631 (+)
Gene ID: HRGMv2_3546_1_70
Type: TC
Location: 70676 - 71995 (+)
Type: TC
Location: 70676 - 71995 (+)
Gene ID: HRGMv2_3546_1_71
Type: pfam
Location: 72026 - 72940 (+)
Type: pfam
Location: 72026 - 72940 (+)
Gene ID: HRGMv2_3546_1_72
Type:
Location: 72960 - 74465 (+)
Type:
Location: 72960 - 74465 (+)
Gene ID: HRGMv2_3546_1_73
Type: CAZyme
Location: 74486 - 76195 (+)
Type: CAZyme
Location: 74486 - 76195 (+)
Gene ID: HRGMv2_3546_1_74
Type: CAZyme
Location: 76212 - 78443 (+)
Type: CAZyme
Location: 76212 - 78443 (+)
Gene ID: HRGMv2_3546_1_75
Type: pfam
Location: 78455 - 79993 (+)
Type: pfam
Location: 78455 - 79993 (+)
Gene ID: HRGMv2_3546_1_76
Type: CAZyme
Location: 79957 - 80697 (+)
Type: CAZyme
Location: 79957 - 80697 (+)
Gene ID: HRGMv2_3546_1_77
Type: pfam
Location: 80722 - 81063 (+)
Type: pfam
Location: 80722 - 81063 (+)
Gene ID: HRGMv2_3546_1_78
Type: CAZyme
Location: 81075 - 82112 (+)
Type: CAZyme
Location: 81075 - 82112 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-269
Species
CAG-269 sp934130705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.