PROTEIN: HRGMv2_3546_1_72
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
HRGMv2_3546_1_72.pdb
Genome ID:
Protein ID:
HRGMv2_3546_1_72
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MEQSVLEKFN SNIIKWYPFE KEKSILQVRK NEWIKNELEK NNLKIDTVES IEDNTDYKYD 60 YVLIYGYENY NNNIKEIISM LNENGKILII GNNQFGINTW SKYDLDSNKG VLNLEEHQKE 120 NKTISSIKKE LKQEGLDTIN TFLAFPDYKT SELIVNEKFD LDKSQIEKYN PNIYEGEIKV 180 FDEIKVLKNI LENASEMKEF FANSYFIEAS KNKNNNDIKY ISFNNCRKEE YQLMTIIKDD 240 VVEKLPTNAK AQKHIENMGK IIKNIKNENI EILDYEENSK IYSKLVKNEK TLDRILARKY 300 NNIEELIQIL NEYKNVLLQN SKSYSECKEK INIDGNEEQL EQLNYLKNGY WDLIPKNCFY 360 INQKFVFFDQ EWEKDYLPVE FILYRAIINS YDLVRKINVE ELLKEINILQ YKELFEKLDE 420 KIRDEIIDNK VHEAMYKKYD LKAIDNLIND NKAYYEENSR KDEYIKNLEK YVEELKLDNT 480 KKQEYIEILE EKLSKKKKRF F 501
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A829WPC6 | GT2 , GT4 | 1 | 463 | 29 | 533 | 0.5351 |
0.8355 |
| A0A4P9E9V2 | GT2 , GT4 | 1 | 487 | 42 | 702 | 0.532 |
0.8658 |
| A0A2T4T973 | GT2 , GT4 | 1 | 475 | 26 | 517 | 0.5217 |
0.7869 |
| C6LFR9 | GT2 , GT4 | 1 | 462 | 42 | 579 | 0.5053 |
0.864 |
| AF-A0A7L6BS49-F1-model_v4 | GT4 | 1 | 490 | 61 | 614 | 0.5009 |
0.7055 |
| AF-A0A385Q4F2-F1-model_v4 | GT2 , GT4 | 1 | 463 | 21 | 473 | 0.5006 |
0.7844 |
| AF-W5VX79-F1-model_v4 | GT2 | 1 | 483 | 50 | 854 | 0.5002 |
0.7334 |
| A0A656QNS9 | GT4 | 1 | 501 | 58 | 614 | 0.4966 |
0.695 |
| AF-Q82X16-F1-model_v4 | GT4 | 1 | 475 | 61 | 594 | 0.495 |
0.707 |
| AF-A0A1W6YSP4-F1-model_v4 | GT4 | 1 | 480 | 58 | 593 | 0.4941 |
0.7114 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A829WPC6 | GT2 , GT4 | 1 | 463 | 29 | 533 | 0.5351 |
0.8355 |
| A0A4P9E9V2 | GT2 , GT4 | 1 | 487 | 42 | 702 | 0.532 |
0.8658 |
| A0A2T4T973 | GT2 , GT4 | 1 | 475 | 26 | 517 | 0.5217 |
0.7869 |
| C6LFR9 | GT2 , GT4 | 1 | 462 | 42 | 579 | 0.5053 |
0.864 |
| A0A7L6BS49 | GT4 | 1 | 490 | 61 | 614 | 0.5009 |
0.7055 |
| W5VX79 | GT2 | 1 | 483 | 50 | 854 | 0.5002 |
0.7334 |
| A0A656QNS9 | GT4 | 1 | 501 | 58 | 614 | 0.4966 |
0.695 |
| Q82X16 | GT4 | 1 | 475 | 61 | 594 | 0.495 |
0.707 |
| QVI64857.1 | GT2 , GT4 | 1 | 488 | 66 | 1215 | 0.4948 |
0.7433 |
| A0A1W6YSP4 | GT4 | 1 | 480 | 58 | 593 | 0.4941 |
0.7114 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.