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Cluster: HRGMv2_3490_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3490_5 HRGMv2_3490_5_23 26263 27198 + 3.A.1.2.16
TC HRGMv2_3490_5 HRGMv2_3490_5_24 27215 28921 + 1.B.52.2.1
CAZyme HRGMv2_3490_5 HRGMv2_3490_5_25 29353 30084 + GH26
CAZyme HRGMv2_3490_5 HRGMv2_3490_5_26 30243 30884 - CBM27
CAZyme HRGMv2_3490_5 HRGMv2_3490_5_27 30900 32240 - GH26
NULL(UNKNOWN) HRGMv2_3490_5 HRGMv2_3490_5_28 32738 33271 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3490_5 HRGMv2_3490_5_29 33305 34567 + CE3
CAZyme HRGMv2_3490_5 HRGMv2_3490_5_30 34615 35553 + CE2
NULL(UNKNOWN) HRGMv2_3490_5 HRGMv2_3490_5_31 35586 35741 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3490_5 HRGMv2_3490_5_32 35845 37035 - 2.A.1.46.5
Gene ID: HRGMv2_3490_5_23
Type: TC
Location: 26263 - 27198 (+)
Gene ID: HRGMv2_3490_5_24
Type: TC
Location: 27215 - 28921 (+)
Gene ID: HRGMv2_3490_5_25
Type: CAZyme
Location: 29353 - 30084 (+)
Gene ID: HRGMv2_3490_5_26
Type: CAZyme
Location: 30243 - 30884 (-)
Gene ID: HRGMv2_3490_5_27
Type: CAZyme
Location: 30900 - 32240 (-)
Gene ID: HRGMv2_3490_5_28
Type:
Location: 32738 - 33271 (+)
Gene ID: HRGMv2_3490_5_29
Type: CAZyme
Location: 33305 - 34567 (+)
Gene ID: HRGMv2_3490_5_30
Type: CAZyme
Location: 34615 - 35553 (+)
Gene ID: HRGMv2_3490_5_31
Type:
Location: 35586 - 35741 (+)
Gene ID: HRGMv2_3490_5_32
Type: TC
Location: 35845 - 37035 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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